Evidence map›Paper›PMID 26190099›Full record

ArticleInternational journal of laboratory hematology2015

A multiplex method for detection of glucose-6-phosphate dehydrogenase (G6PD) gene mutations.

L Zhang, Y Yang, R Liu, Q Li, F Yang, L Ma, H Liu, X Chen, Z Yang, L Cui and 1 more

Open access · greenAbstract read
In one paragraph

Article in International journal of laboratory hematology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.3field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The glucose-6-phosphate dehydrogenase Mahidol variant protects against uncomplicated Plasmodium vivax infection and reduces disease severity in a Kachin population from northeast Myanmar.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2019
    Article
  5. Point-of-Care Testing for G6PD Deficiency: Opportunities for Screening.International journal of neonatal screening · 2018
    Review
  6. A young man with severe acute haemolytic anaemia.BMJ (Clinical research ed.) · 2017
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

L ZhangDepartment of Cell Biology and Medical Genetics, Kunming Medical University, Kunming, Yunnan Province, China.
Y YangDepartment of Cell Biology and Medical Genetics, Kunming Medical University, Kunming, Yunnan Province, China.
R LiuThe First Affiliated Hospital, Kunming Medical University, Kunming, Yunnan Province, China.
Q LiDepartment of Cell Biology and Medical Genetics, Kunming Medical University, Kunming, Yunnan Province, China.
F YangDepartment of Cell Biology and Medical Genetics, Kunming Medical University, Kunming, Yunnan Province, China.
L MaDepartment of Histology and Embryology, Kunming Medical University, Kunming, Yunnan Province, China.
H LiuThe First Affiliated Hospital, Kunming Medical University, Kunming, Yunnan Province, China.
X ChenKunming City Maternal and Child Health Hospital, Kunming, Yunnan Province, China.
Z YangDepartment of Pathogen Biology and Immunology, Kunming Medical University, Kunming, Yunnan Province, China.
L CuiDepartment of Entomology, The Pennsylvania State University, University Park, Pennsylvania, USA.
Y HeDepartment of Cell Biology and Medical Genetics, Kunming Medical University, Kunming, Yunnan Province, China.
Kunming Medical University · CNFirst Affiliated Hospital of Kunming Medical University · CNPennsylvania State University · USYunnan Maternal and Child Health · CN

Funding

Southeast Asia Malaria Research CenterU19AI089672 · NIAID · UNIVERSITY OF SOUTH FLORIDA · PI CUI, LIWANG · 2010 to 2023
$28.9M
NIAID NIH HHS U19 AI089672NIAID NIH HHS U19AI089672
6 · The paper itself

Abstract

introductionGlucose-6-phosphate dehydrogenase (G6PD) deficiency is the most common human enzyme defect caused by G6PD gene mutations. This study aimed to develop a cost-effective, multiplex, genotyping method for detecting common mutations in the G6PD gene.

methodsWe used a SNaPshot approach to genotype multiple G6PD mutations that are common to human populations in South-East Asia. This assay is based on multiplex PCR coupled with primer extension reactions. Different G6PD gene mutations were determined by peak retention time and colors of the primer extension products.

resultsWe designed PCR primers for multiplex amplification of the G6PD gene fragments and for primer extension reactions to genotype 11 G6PD mutations. DNA samples from a total of 120 unrelated G6PD-deficient individuals from the China-Myanmar border area were used to establish and validate this method. Direct sequencing of the PCR products demonstrated 100% concordance between the SNaPshot and the sequencing results.

conclusionThe SNaPshot method offers a specific and sensitive alternative for simultaneously interrogating multiple G6PD mutations.

Indexed as

Multiplex Polymerase Chain ReactionMutationAdolescentDNA Mutational AnalysisFemaleGenotyping TechniquesGlucosephosphate DehydrogenaseGlucosephosphate Dehydrogenase DeficiencyHumansMalePolymorphism, Single NucleotideGlucosephosphate DehydrogenaseGlucose-6-phosphate dehydrogenase deficiencymutation detectionSNaPshot assay

Identifiers

PMID26190099
PMCPMC4715770
OpenAlexW2109364968

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.