ArticleScientific reports2015
Transcriptome sequencing of three Pseudo-nitzschia species reveals comparable gene sets and the presence of Nitric Oxide Synthase genes in diatoms.
Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
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25 citing papers in PubMed, 68 citations in OpenAlex.
- De novo transcriptome assembly of a lipoxygenase knock-down strain in the diatom Pseudo-nitzschia arenysensis.Scientific data · 2024Article
- Physiology governing diatom vs. dinoflagellate bloom and decline in coastal Santa Monica Bay.Frontiers in microbiology · 2023Article
- Genomic capacities for Reactive Oxygen Species metabolism across marine phytoplankton.PloS one · 2023Article
- Phenological segregation suggests speciation by time in the planktonic diatomEcology and evolution · 2022Article
- Trade-off between sex and growth in diatoms: Molecular mechanisms and demographic implications.Science advances · 2022Article
- Marine Neurotoxins' Effects on Environmental and Human Health: An OMICS Overview.Marine drugs · 2021Review
- Diploid genomic architecture of Nitzschia inconspicua, an elite biomass production diatom.Scientific reports · 2021Article
- Full-Length Transcriptome ofMarine drugs · 2021Article
- Article
- Identification of Partner Proteins of the AlgaeFrontiers in plant science · 2021Article
- Insights into the Light Response ofMarine drugs · 2020Article
- A Metabolomics Exploration of the Sexual Phase in the Marine DiatomMarine drugs · 2020Article
- Chimera of Globin/Nitric Oxide Synthase: Toward Improving Nitric Oxide Homeostasis and Nitrogen Recycling and Availability.Frontiers in plant science · 2020Article
- Marine Natural Products from Microalgae: An -Omics Overview.Marine drugs · 2019Review
- Inter- and Intra-Specific Transcriptional and Phenotypic Responses of Pseudo-nitzschia under Different Nutrient Conditions.Genome biology and evolution · 2019Article
- Transcriptomic responses to grazing reveal the metabolic pathway leading to the biosynthesis of domoic acid and highlight different defense strategies in diatoms.BMC molecular biology · 2019Article
- A singular nitric oxide synthase with a globin domain found in Synechococcus PCC 7335 mobilizes N from arginine to nitrate.Scientific reports · 2018Article
- Grazer-induced transcriptomic and metabolomic response of the chain-forming diatom Skeletonema marinoi.The ISME journal · 2018Article
- Paleolimnology and resurrection ecology: The future of reconstructing the past.Evolutionary applications · 2018Review
- Climate Change and the Impact of Greenhouse Gasses: COFrontiers in plant science · 2018Review
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Authors and funding
7 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Diatoms are among the most diverse eukaryotic microorganisms on Earth, they are responsible for a large fraction of primary production in the oceans and can be found in different habitats. Pseudo-nitzschia are marine planktonic diatoms responsible for blooms in coastal and oceanic waters. We analyzed the transcriptome of three species, Pseudo-nitzschia arenysensis, Pseudo-nitzschia delicatissima and Pseudo-nitzschia multistriata, with different levels of genetic relatedness. These species have a worldwide distribution and the last one produces the neurotoxin domoic acid. We were able to annotate about 80% of the sequences in each transcriptome and the analysis of the relative functional annotations allowed comparison of the main metabolic pathways, pathways involved in the biosynthesis of isoprenoids (MAV and MEP pathways), and pathways putatively involved in domoic acid synthesis. The search for homologous transcripts among the target species and other congeneric species resulted in the discovery of a sequence annotated as Nitric Oxide Synthase (NOS), found uniquely in Pseudo-nitzschia multistriata. The predicted protein product contained all the domains of the canonical metazoan sequence. Putative NOS sequences were found in other available diatom datasets, supporting a role for nitric oxide as signaling molecule in this group of microalgae.
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