Evidence map›Paper›PMID 26187466›Full record

ArticleThe Journal of biological chemistry2015

Zeta Inhibitory Peptide Disrupts Electrostatic Interactions That Maintain Atypical Protein Kinase C in Its Active Conformation on the Scaffold p62.

Li-Chun Lisa Tsai, Lei Xie, Kim Dore, Li Xie, Jason C Del Rio, Charles C King, Guillermo Martinez-Ariza, Christopher Hulme, Roberto Malinow, Philip E Bourne and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Reversing Cocaine-Induced Plasticity with Zeta Inhibitory Peptide.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2019
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Protein kinase C: perfectly balanced.Critical reviews in biochemistry and molecular biology · 2018
    Review
  19. Protein kinase C as a tumor suppressor.Seminars in cancer biology · 2018
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Li-Chun Lisa TsaiFrom the Department of Pharmacology.
Lei Xiethe Department of Computer Science, Hunter College, the City University of New York, New York, New York 10065.
Kim DoreDepartment of Neurosciences.
Li XieSkaggs School of Pharmacy, and.
Jason C Del RioFrom the Department of Pharmacology.
Charles C KingPediatric Diabetes Research Center, University of California San Diego, La Jolla, California 92093.
Guillermo Martinez-Arizathe Department of Pharmacology and Toxicology, College of Pharmacy, University of Arizona, Tucson, Arizona 85721, and.
Christopher Hulmethe Department of Pharmacology and Toxicology, College of Pharmacy, University of Arizona, Tucson, Arizona 85721, and.
Roberto MalinowDepartment of Neurosciences.
Philip E Bournethe Office of the Director, the National Institutes of Health, Bethesda, Maryland 20892.
Alexandra C NewtonFrom the Department of Pharmacology, anewton@ucsd.edu.
University of California, San Diego · US

Funding

Project# 4: INTERACTIONS OF ANCHORING PROTEINS WITH THEIR TARGETSP01DK054441 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TAYLOR, SUSAN S. · 1999 to 2017
$27.3M
GRADUATE TRAINING IN CELLULAR &MOLECULAR PHARMACOLOGYT32GM007752 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BROWN, JOAN HELLER, HANDEL, TRACY M · 1985 to 2023
$13.5M
MECHANISMS OF SYNAPTIC LTP--SILENT SYNAPSESR01MH049159 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MALINOW, ROBERTO · 1997 to 2019
$4.7M
Novel roles by glutamatergic receptors in the synaptic effects of beta amyloidR01AG032132 · NIA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MALINOW, ROBERTO · 2008 to 2017
$4.5M
Structural Bioinformatics, Systems Pharmacology and Scholarly CommunicationZIALM000928 · NLM · NATIONAL LIBRARY OF MEDICINE · PI BOURNE, PHILIP · 2015 to 2016
$1.3M
NIA NIH HHS R01 AG032132NIDDK NIH HHS 5T32DK007494NIDDK NIH HHS P01 DK054441NIDDK NIH HHS P01 DK54441NIGMS NIH HHS T32 GM007752NIGMS NIH HHS T32GM007752NIMH NIH HHS R01 MH049159
6 · The paper itself

Abstract

Atypical protein kinase C (aPKC) enzymes signal on protein scaffolds, yet how they are maintained in an active conformation on scaffolds is unclear. A myristoylated peptide based on the autoinhibitory pseudosubstrate fragment of the atypical PKCζ, zeta inhibitory peptide (ZIP), has been extensively used to inhibit aPKC activity; however, we have previously shown that ZIP does not inhibit the catalytic activity of aPKC isozymes in cells (Wu-Zhang, A. X., Schramm, C. L., Nabavi, S., Malinow, R., and Newton, A. C. (2012) J. Biol. Chem. 287, 12879-12885). Here we sought to identify a bona fide target of ZIP and, in so doing, unveiled a novel mechanism by which aPKCs are maintained in an active conformation on a protein scaffold. Specifically, we used protein-protein interaction network analysis, structural modeling, and protein-protein docking to predict that ZIP binds an acidic surface on the Phox and Bem1 (PB1) domain of p62, an interaction validated by peptide array analysis. Using a genetically encoded reporter for PKC activity fused to the p62 scaffold, we show that ZIP inhibits the activity of wild-type aPKC, but not a construct lacking the pseudosubstrate. These data support a model in which the pseudosubstrate of aPKCs is tethered to the acidic surface on p62, locking aPKC in an open, signaling-competent conformation. ZIP competes for binding to the acidic surface, resulting in displacement of the pseudosubstrate of aPKC and re-engagement in the substrate-binding cavity. This study not only identifies a cellular target for ZIP, but also unveils a novel mechanism by which scaffolded aPKC is maintained in an active conformation.

Indexed as

Adaptor Proteins, Signal TransducingAmino Acid SequenceAnimalsBinding, CompetitiveBinding SitesBlotting, WesternChlorocebus aethiopsCOS CellsFluorescence Resonance Energy TransferHEK293 CellsHumansIsoenzymesModels, MolecularMolecular Sequence DataPregnancy ProteinsProtein BindingAdaptor Proteins, Signal TransducingIsoenzymesPKC-3 proteinPregnancy ProteinsProtein Kinase CProtein Kinase C-lambdaProtein Kinase C zetaReceptors, AMPASequestosome-1 ProteinSQSTM1 protein, humanzeta inhibitor protein 14 kDa, humanatypical protein kinase C (aPKC)enzyme mechanismp62 (sequestosome 1(SQSTM1))protein-protein interactionscaffold proteinserine/threonine protein kinase

Identifiers

PMID26187466
PMCPMC4571940
OpenAlexW1812864516

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.