Evidence map›Paper›PMID 26186976›Full record

ArticleExtremophiles : life under extreme conditions2015

A snapshot of microbial communities from the Kutch: one of the largest salt deserts in the World.

Aanal S Pandit, Madhvi N Joshi, Poonam Bhargava, Inayatullah Shaikh, Garima N Ayachit, Sandeep R Raj, Akshay K Saxena, Snehal B Bagatharia

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Article in Extremophiles : life under extreme conditions, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

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20citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Deciphering the microbial communities of alkaline hot spring in Panamik, Ladakh, India using a high-throughput sequencing approach.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
  5. Microbial diversity in polyextreme salt flats and their potential applications.Environmental science and pollution research international · 2024
    Review
  6. Article
  7. Review
  8. Microbial Biogeochemical Cycling of Nitrogen in Arid Ecosystems.Microbiology and molecular biology reviews : MMBR · 2022
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
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  18. Article
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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Aanal S PanditGujarat State Biotechnology Mission, Department of Science and Technology, Government of Gujarat, 11th Block, 9th Floor, Udyog Bhavan, Gandhinagar, Gujarat, 382 011, India.
Madhvi N Joshi
Poonam Bhargava
Inayatullah Shaikh
Garima N Ayachit
Sandeep R Raj
Akshay K Saxena
Snehal B Bagatharia

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Here we present the first report on the taxonomic diversity of the microbial communities of the saline desert of the Great Rann of Kutch, Gujarat, India, using a metagenomic approach. Seven samples, differing in salinity levels and covering different seasons, were analysed to investigate the dynamics of microbial communities in relation to salinity and season. Metagenomic data generated using whole metagenome sequencing revealed that despite its very high salinity (4.11-30.79 %), the saline desert's microbiota had a rich microbial diversity that included all major phyla. Notably, 67 archaeal genera, representing more than 60 % of all known archaeal genera, were present in this ecosystem. A strong positive correlation (0.85) was observed between the presence of the extremely halophilic bacterium Salinibacter and salinity level. Taxonomic and functional comparisons of the saline desert metagenome with those of other publicly available metagenomes (i.e. sea, hypersaline lagoon, solar saltern, brine, hot desert) was carried out. The microbial community of the Kutch was found to be unique yet more similar to the sea biomes followed by hypersaline lagoon.

Indexed as

Desert ClimateMicrobiotaSalt ToleranceSoil MicrobiologyBiomassGenome, ArchaealGenome, BacterialIndiaPhylogenySeasons

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.