Evidence map›Paper›PMID 26186504›Full record

ArticleBiochemistry2015

Inhibition of the dapE-Encoded N-Succinyl-L,L-diaminopimelic Acid Desuccinylase from Neisseria meningitidis by L-Captopril.

Anna Starus, Boguslaw Nocek, Brian Bennett, James A Larrabee, Daniel L Shaw, Wisath Sae-Lee, Marie T Russo, Danuta M Gillner, Magdalena Makowska-Grzyska, Andrzej Joachimiak and 1 more

Abstract read
In one paragraph

Article in Biochemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
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  6. Frontiers in chemistry · 2024
    Article
  7. Metal-ion promiscuity of microbial enzyme DapE at its second metal-binding site.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2021
    Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Anna Starus†Department of Chemistry and Biochemistry, Loyola University-Chicago, 1068 West Sheridan Road, Chicago, Illinois 60626, United States.
Boguslaw Nocek‡Center for Structural Genomics of Infectious Diseases, Computation Institute, University of Chicago, 5735 South Ellis Avenue, Chicago, Illinois 60637, United States.
Brian Bennett§Department of Physics, Marquette University, Milwaukee, Wisconsin 53201, United States.
James A Larrabee∥Department of Chemistry and Biochemistry, Middlebury College, Middlebury, Vermont 05753, United States.
Daniel L Shaw∥Department of Chemistry and Biochemistry, Middlebury College, Middlebury, Vermont 05753, United States.
Wisath Sae-Lee∥Department of Chemistry and Biochemistry, Middlebury College, Middlebury, Vermont 05753, United States.
Marie T Russo∥Department of Chemistry and Biochemistry, Middlebury College, Middlebury, Vermont 05753, United States.
Danuta M Gillner⊥Department of Chemistry, Silesian University of Technology, 44-100 Gliwice, Poland.
Magdalena Makowska-Grzyska‡Center for Structural Genomics of Infectious Diseases, Computation Institute, University of Chicago, 5735 South Ellis Avenue, Chicago, Illinois 60637, United States.
Andrzej Joachimiak‡Center for Structural Genomics of Infectious Diseases, Computation Institute, University of Chicago, 5735 South Ellis Avenue, Chicago, Illinois 60637, United States.
Richard C Holz#Department of Chemistry, Marquette University, Milwaukee, Wisconsin 53201, United States.
Middlebury College · USJoint Center for Structural Genomics · USMarquette University · USLoyola University Chicago · USSilesian University of Technology · PLUniversity of Chicago · US

Funding

Midwest Center for Structural GenomicsU54GM094585 · NIGMS · UNIVERSITY OF CHICAGO · PI ANDERSON, WAYNE F · 2010 to 2014
$33.7M
TR&D Project 3P41EB001980 · NIBIB · MEDICAL COLLEGE OF WISCONSIN · PI KLUG, CANDICE S · 2003 to 2017
$16.3M
A New Antibacterial Drug Target: Analyzing Inhibitor Binding to a Bacterial MetalR15AI085559 · NIAID · LOYOLA UNIVERSITY OF CHICAGO · PI BECKER, DANIEL PAUL · 2010 to 2010
$400k
NIAID NIH HHS HHSN272201200026CNIAID NIH HHS R15 AI085559NIAID NIH HHS R15 AI085559-01A1NIBIB NIH HHS P41 EB001980NIGMS NIH HHS GM094585NIGMS NIH HHS U54 GM094585PHS HHS HHSN272201200026C
6 · The paper itself

Abstract

Binding of the competitive inhibitor L-captopril to the dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase from Neisseria meningitidis (NmDapE) was examined by kinetic, spectroscopic, and crystallographic methods. L-Captopril, an angiotensin-converting enzyme (ACE) inhibitor, was previously shown to be a potent inhibitor of the DapE from Haemophilus influenzae (HiDapE) with an IC50 of 3.3 μM and a measured Ki of 1.8 μM and displayed a dose-responsive antibiotic activity toward Escherichia coli. L-Captopril is also a competitive inhibitor of NmDapE with a Ki of 2.8 μM. To examine the nature of the interaction of L-captopril with the dinuclear active site of DapE, we have obtained electron paramagnetic resonance (EPR) and magnetic circular dichroism (MCD) data for the enzymatically hyperactive Co(II)-substituted forms of both HiDapE and NmDapE. EPR and MCD data indicate that the two Co(II) ions in DapE are antiferromagnetically coupled, yielding an S = 0 ground state, and suggest a thiolate bridge between the two metal ions. Verification of a thiolate-bridged dinuclear complex was obtained by determining the three-dimensional X-ray crystal structure of NmDapE in complex with L-captopril at 1.8 Å resolution. Combination of these data provides new insights into binding of L-captopril to the active site of DapE enzymes as well as important inhibitor-active site residue interaction's. Such information is critical for the design of new, potent inhibitors of DapE enzymes.

Indexed as

Bacterial ProteinsLyasesAngiotensin-Converting Enzyme InhibitorsCaptoprilCatalytic DomainCircular DichroismCrystallography, X-RayNeisseria meningitidisAngiotensin-Converting Enzyme InhibitorsBacterial ProteinsCaptoprilLyases

Identifiers

PMID26186504
PMCPMC4671288
OpenAlexW2407707298

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.