Evidence map›Paper›PMID 26184996›Full record

ArticleJournal of experimental botany2015

A role for seed storage proteins in Arabidopsis seed longevity.

Thu-Phuong Nguyen, Gwendal Cueff, Dwayne D Hegedus, Loïc Rajjou, Leónie Bentsink

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed, 2 pooled it
19.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 2 syntheses or guidelines pooled it, 163 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Translational landscape during seed germination revealed by ribosome profiling.The Plant journal : for cell and molecular biology · 2026
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  9. Black cumin (Frontiers in nutrition · 2026
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  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Investigating the Effects ofmicroPublication biology · 2025
    Article
  16. Article
  17. Review
  18. Seed longevity and genome damage.Bioscience reports · 2024
    Review
  19. Article
  20. Review

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 3 countries.

Thu-Phuong NguyenWageningen Seed Lab, Laboratory of Plant Physiology, Wageningen University, 6708 PB Wageningen, The Netherlands Department of Molecular Plant Physiology, Utrecht University, 3584 CH Utrecht, The Netherlands.
Gwendal CueffINRA, Institut Jean-Pierre Bourgin, UMR 1318 INRA-AgroParisTech, ERL CNRS 3559, Laboratory of Excellence 'Saclay Plant Sciences' (LabEx SPS), RD10, F-78026 Versailles Cedex, France AgroParisTech, Chair of Plant Physiology, 16 rue Claude Bernard, F-75231 Paris Cedex 05, France.
Dwayne D HegedusDepartment of Food and Bioproduct Sciences, University of Saskatchewan, Saskatoon S7N5A9, Canada Agriculture and Agri-Food Canada, Saskatoon, Saskatchewan S7N 0X2, Canada.
Loïc RajjouINRA, Institut Jean-Pierre Bourgin, UMR 1318 INRA-AgroParisTech, ERL CNRS 3559, Laboratory of Excellence 'Saclay Plant Sciences' (LabEx SPS), RD10, F-78026 Versailles Cedex, France AgroParisTech, Chair of Plant Physiology, 16 rue Claude Bernard, F-75231 Paris Cedex 05, France.
Leónie BentsinkWageningen Seed Lab, Laboratory of Plant Physiology, Wageningen University, 6708 PB Wageningen, The Netherlands Department of Molecular Plant Physiology, Utrecht University, 3584 CH Utrecht, The Netherlands leonie.bentsink@wur.nl.
Institut Jean-Pierre Bourgin · FRUniversité Claude Bernard Lyon 1 · FRUniversity of Saskatchewan · CAUtrecht University · NLWageningen University & Research · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proteomics approaches have been a useful tool for determining the biological roles and functions of individual proteins and identifying the molecular mechanisms that govern seed germination, vigour and viability in response to ageing. In this work the dry seed proteome of four Arabidopsis thaliana genotypes, that carry introgression fragments at the position of seed longevity quantitative trait loci and as a result display different levels of seed longevity, was investigated. Seeds at two physiological states, after-ripened seeds that had the full germination ability and aged (stored) seeds of which the germination ability was severely reduced, were compared. Aged dry seed proteomes were markedly different from the after-ripened and reflected the seed longevity level of the four genotypes, despite the fact that dry seeds are metabolically quiescent. Results confirmed the role of antioxidant systems, notably vitamin E, and indicated that protection and maintenance of the translation machinery and energy pathways are essential for seed longevity. Moreover, a new role for seed storage proteins (SSPs) was identified in dry seeds during ageing. Cruciferins (CRUs) are the most abundant SSPs in Arabidopsis and seeds of a triple mutant for three CRU isoforms (crua crub cruc) were more sensitive to artificial ageing and their seed proteins were highly oxidized compared with wild-type seeds. These results confirm that oxidation is involved in seed deterioration and that SSPs buffer the seed from oxidative stress, thus protecting important proteins required for seed germination and seedling formation.

Indexed as

GerminationArabidopsisGene Expression Regulation, PlantProteomeSeedsSeed Storage ProteinsProteomeSeed Storage ProteinsArabidopsiscarbonylationproteomicsreactive oxygen speciesseed longevityseed storage proteins.

Identifiers

PMID26184996
PMCPMC4588887
OpenAlexW2175472257

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.