Evidence map›Paper›PMID 26184877›Full record

ArticleNucleic acids research2015

ZNF555 protein binds to transcriptional activator site of 4qA allele and ANT1: potential implication in Facioscapulohumeral dystrophy.

Elena Kim, Jeremy Rich, Adam Karoutas, Pavel Tarlykov, Emilie Cochet, Daria Malysheva, Kamel Mamchaoui, Vasily Ogryzko, Iryna Pirozhkova

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

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  10. Opposite Expression Patterns ofFrontiers in psychiatry · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 3 countries.

Elena KimCNRS, University Paris-Sud, UMR-8126, Gustave Roussy, Villejuif 94408, France.
Jeremy RichCNRS, University Paris-Sud, UMR-8126, Gustave Roussy, Villejuif 94408, France.
Adam KaroutasCNRS, University Paris-Sud, UMR-8126, Gustave Roussy, Villejuif 94408, France.
Pavel TarlykovNational Center for Biotechnology, Astana 010000, Kazakhstan.ORCID http://orcid.org/0000-0003-2075-307X
Emilie CochetCNRS, University Paris-Sud, UMR-8126, Gustave Roussy, Villejuif 94408, France Proteomic Platform, IRCIV Gustave Roussy, Villejuif 94408, France.
Daria MalyshevaCNRS, University Paris-Sud, UMR-8126, Gustave Roussy, Villejuif 94408, France.
Kamel MamchaouiThérapie des maladies du muscle strié, Institut de Myologie, UM76-Pierre et Marie CURIE University/U974-INSERM/UMR7215-CNRS, Paris 75013, France.
Vasily OgryzkoProteomic Platform, IRCIV Gustave Roussy, Villejuif 94408, France INSERM, CNRS, University Paris-Sud, UMR-8126, Gustave Roussy, Villejuif 94408, France.
Iryna PirozhkovaCNRS, University Paris-Sud, UMR-8126, Gustave Roussy, Villejuif 94408, France iryna.pirozhkova@gustaveroussy.fr.
Centre National de la Recherche Scientifique · FRNational Center for Biotechnology · KZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Facioscapulohumeral dystrophy (FSHD) is an epi/genetic satellite disease associated with at least two satellite sequences in 4q35: (i) D4Z4 macrosatellite and (ii) β-satellite repeats (BSR), a prevalent part of the 4qA allele. Most of the recent FSHD studies have been focused on a DUX4 transcript inside D4Z4 and its tandem contraction in FSHD patients. However, the D4Z4-contraction alone is not pathological, which would also require the 4qA allele. Since little is known about BSR, we investigated the 4qA BSR functional role in the transcriptional control of the FSHD region 4q35. We have shown that an individual BSR possesses enhancer activity leading to activation of the Adenine Nucleotide Translocator 1 gene (ANT1), a major FSHD candidate gene. We have identified ZNF555, a previously uncharacterized protein, as a putative transcriptional factor highly expressed in human primary myoblasts that interacts with the BSR enhancer site and impacts the ANT1 promoter activity in FSHD myoblasts. The discovery of the functional role of the 4qA allele and ZNF555 in the transcriptional control of ANT1 advances our understanding of FSHD pathogenesis and provides potential therapeutic targets.

Indexed as

Chromosomes, Human, Pair 4Transcriptional ActivationAdenine Nucleotide Translocator 1AllelesBinding SitesCells, CulturedDNA, SatelliteEnhancer Elements, GeneticGenetic LociHumansMicrofilament ProteinsMuscular Dystrophy, FacioscapulohumeralMyoblastsNuclear ProteinsRNA-Binding ProteinsTranscription FactorsAdenine Nucleotide Translocator 1DNA, SatelliteFRG1 protein, humanMicrofilament ProteinsNuclear ProteinsRNA-Binding ProteinsTranscription FactorsZNF555 protein, human

Identifiers

PMID26184877
PMCPMC4787827
OpenAlexW1842958492

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.