Evidence map›Paper›PMID 26182890›Full record

ArticleNMR in biomedicine2015

A statistical clustering approach to discriminating perfusion from conduit vessel signal contributions in a pulmonary ASL MR image.

Shane C Walker, Amran K Asadi, Susan R Hopkins, Richard B Buxton, G K Prisk

Abstract read
In one paragraph

Article in NMR in biomedicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Physiology for the pulmonary functional imager.European journal of radiology · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Shane C WalkerSchool of Medicine, University of California, San Francisco, CA, USA.
Amran K AsadiDepartment of Medicine, University of California, San Diego, CA, USA.
Susan R HopkinsDepartment of Medicine, University of California, San Diego, CA, USA.
Richard B BuxtonDepartment of Radiology, University of California, San Diego, CA, USA.
G K PriskDepartment of Medicine, University of California, San Diego, CA, USA.

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007198 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHI, NEIL C, INSEL, PAUL A · 1985 to 2024
$29.3M
Proton MRI to measure lung ventilation and perfusionR01HL119263 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PRISK, GORDON KIM · 2014 to 2017
$3.6M
Spatial-Temporal Dynamics of Blood Flow in the Normal Human LungR01HL104118 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BUXTON, RICHARD BRUCE, PRISK, GORDON KIM · 2011 to 2014
$2.5M
Imaging Nonlinear Control of the Pulmonary Circulation with Proton MRIR21HL118539 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HOPKINS, SUSAN R · 2013 to 2014
$411k
NHLBI NIH HHS 1R21HL118539NHLBI NIH HHS NIH HL104118NHLBI NIH HHS NIH HL119263NHLBI NIH HHS R01 HL104118NHLBI NIH HHS R01 HL119263NHLBI NIH HHS R21 HL118539NIGMS NIH HHS T32 GM007198
6 · The paper itself

Abstract

The measurement of pulmonary perfusion (blood delivered to the capillary bed within a voxel) using arterial spin labeling (ASL) magnetic resonance imaging is often complicated by signal artifacts from conduit vessels that carry blood destined for voxels at a distant location in the lung. One approach to dealing with conduit vessel contributions involves the application of an absolute threshold on the ASL signal. While useful for identifying a subset of the most dominant high signal conduit image features, signal thresholding cannot discriminate between perfusion and conduit vessel contributions at intermediate and low signal. As an alternative, this article discusses a data-driven statistical approach based on statistical clustering for characterizing and discriminating between capillary perfusion and conduit vessel contributions over the full signal spectrum. An ASL flow image is constructed from the difference between a pair of tagged magnetic resonance images. However, when viewed as a bivariate projection that treats the image pair as independent measures (rather than the univariate quantity that results from the subtraction of the two images), the signal associated with capillary perfusion contributions is observed to cluster independently of the signal associated with conduit vessel contributions. Analyzing the observed clusters using a Gaussian mixture model makes it possible to discriminate between conduit vessel and capillary-perfusion-dominated signal contributions over the full signal spectrum of the ASL image. As a demonstration of feasibility, this study compares the proposed clustering approach with the standard absolute signal threshold strategy in a small number of test images.

Indexed as

Pulmonary CirculationSpin LabelsAdultCluster AnalysisHumansMagnetic Resonance ImagingMalePulmonary ArterySpin Labelsarterial spin labelingfeature segmentationGaussian mixture modelimage processinglog-normal statisticspulmonary blood flowstatistical clustering

Identifiers

PMID26182890
PMCPMC4537803

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.