Evidence map›Paper›PMID 26182244›Full record

ArticlePLoS genetics2015

Arabidopsis PCH2 Mediates Meiotic Chromosome Remodeling and Maturation of Crossovers.

Christophe Lambing, Kim Osman, Komsun Nuntasoontorn, Allan West, James D Higgins, Gregory P Copenhaver, Jianhua Yang, Susan J Armstrong, Karl Mechtler, Elisabeth Roitinger and 1 more

Abstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed.

  1. Review
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  19. ThePNAS nexus · 2023
    Article
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Christophe LambingSchool of Biosciences, University of Birmingham, Edgbaston, Birmingham, United Kingdom.
Kim OsmanSchool of Biosciences, University of Birmingham, Edgbaston, Birmingham, United Kingdom.
Komsun NuntasoontornSchool of Biosciences, University of Birmingham, Edgbaston, Birmingham, United Kingdom.
Allan WestSchool of Biosciences, University of Birmingham, Edgbaston, Birmingham, United Kingdom.
James D HigginsSchool of Biosciences, University of Birmingham, Edgbaston, Birmingham, United Kingdom.
Gregory P CopenhaverDepartment of Biology and Carolina Center for Genome Scientists, University of North Carolina, Chapel Hill, Chapel Hill, North Carolina, United States of America.
Jianhua YangSchool of Biosciences, University of Birmingham, Edgbaston, Birmingham, United Kingdom.
Susan J ArmstrongSchool of Biosciences, University of Birmingham, Edgbaston, Birmingham, United Kingdom.
Karl MechtlerIMP-IMBA, Vienna, Austria.
Elisabeth RoitingerIMP-IMBA, Vienna, Austria.
F Chris H FranklinSchool of Biosciences, University of Birmingham, Edgbaston, Birmingham, United Kingdom.

Funding

Biotechnology and Biological Sciences Research Council BB/K007505/1Biotechnology and Biological Sciences Research Council BB/M004902/1Medical Research Council MR/K015869/1
6 · The paper itself

Abstract

Meiotic chromosomes are organized into linear looped chromatin arrays by a protein axis localized along the loop-bases. Programmed remodelling of the axis occurs during prophase I of meiosis. Structured illumination microscopy (SIM) has revealed dynamic changes in the chromosome axis in Arabidopsis thaliana and Brassica oleracea. We show that the axis associated protein ASY1 is depleted during zygotene concomitant with synaptonemal complex (SC) formation. Study of an Atpch2 mutant demonstrates this requires the conserved AAA+ ATPase, PCH2, which localizes to the sites of axis remodelling. Loss of PCH2 leads to a failure to deplete ASY1 from the axes and compromizes SC polymerisation. Immunolocalization of recombination proteins in Atpch2 indicates that recombination initiation and CO designation during early prophase I occur normally. Evidence suggests that CO interference is initially functional in the mutant but there is a defect in CO maturation following designation. This leads to a reduction in COs and a failure to form COs between some homologous chromosome pairs leading to univalent chromosomes at metaphase I. Genetic analysis reveals that CO distribution is also affected in some chromosome regions. Together these data indicate that the axis remodelling defect in Atpch2 disrupts normal patterned formation of COs.

Indexed as

Adenosine TriphosphatasesArabidopsisArabidopsis ProteinsChromatin Assembly and DisassemblyChromosomes, PlantCrossing Over, GeneticDNA-Binding ProteinsMeiosisSynaptonemal ComplexAdenosine TriphosphatasesArabidopsis ProteinsASY1 protein, ArabidopsisDNA-Binding ProteinsPCH2 protein, Arabidopsis

Identifiers

PMID26182244
PMCPMC4504720

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.