ArticlePloS one2015
Construction of High-Density Genetic Map in Barley through Restriction-Site Associated DNA Sequencing.
Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
- Elucidation of the genetic architecture stabilizing the heading time in barley (Hordeum vulgare L.).Planta · 2026Article
- QTL mapping of shoot and seed traits impacted by Drought in Barley using a recombinant inbred line Population.BMC plant biology · 2023Article
- QTL mapping of oleic acid content in modern VNIIMK sunflower (Helianthus annuus L.) lines by using GBS-based SNP map.PloS one · 2023Article
- Discovery of DNA polymorphisms via genome-resequencing and development of molecular markers between two barley cultivars.Plant cell reports · 2022Article
- Fine mapping of the reduced height gene Rht22 in tetraploid wheat landrace Jianyangailanmai (Triticum turgidum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- An Induced Mutation inFrontiers in plant science · 2021Article
- Construction of a high-density genetic map and fine mapping of a candidate gene locus for a novel branched-spike mutant in barley.PloS one · 2020Article
- A High-Density Genetic Linkage Map of SLAFs and QTL Analysis of Grain Size and Weight in Barley (Frontiers in plant science · 2020Article
- Investigation of Chinese Wolfberry (Lycium spp.) Germplasm by Restriction Site-Associated DNA Sequencing (RAD-seq).Biochemical genetics · 2018Article
- Mapping adult plant stem rust resistance in barley accessions Hietpas-5 and GAW-79.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018Article
- GWAS analysis in spring barley (Hordeum vulgare L.) for morphological traits exposed to drought.PloS one · 2018Article
- A RAD-Based Genetic Map for Anchoring Scaffold Sequences and Identifying QTLs in Bitter Gourd (Frontiers in plant science · 2018Article
- QTLs for earliness and yield-forming traits in the Lubuski × CamB barley RIL population under various water regimes.Journal of applied genetics · 2017Article
- Characterization of the sdw1 semi-dwarf gene in barley.BMC plant biology · 2017Article
- Effect of Co-segregating Markers on High-Density Genetic Maps and Prediction of Map Expansion Using Machine Learning Algorithms.Frontiers in plant science · 2017Article
- Development of the first consensus genetic map of intermediate wheatgrass (Thinopyrum intermedium) using genotyping-by-sequencing.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017Article
- Genetic Divergence between Camellia sinensis and Its Wild Relatives Revealed via Genome-Wide SNPs from RAD Sequencing.PloS one · 2016Article
- SNP-Based QTL Mapping of 15 Complex Traits in Barley under Rain-Fed and Well-Watered Conditions by a Mixed Modeling Approach.Frontiers in plant science · 2016Article
Corrections and comments
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Genetic maps in barley are usually constructed from a limited number of molecular markers such as SSR (simple sequence repeat) and DarT (diversity arrays technology). These markers must be first developed before being used for genotyping. Here, we introduce a new strategy based on sequencing progeny of a doubled haploid population from Baudin × AC Metcalfe to construct a genetic map in barley. About 13,547 polymorphic SNP tags with >93% calling rate were selected to construct the genetic map. A total of 12,998 SNP tags were anchored to seven linkage groups which spanned a cumulative 967.6 cM genetic distance. The high-density genetic map can be used for QTL mapping and the assembly of WGS and BAC contigs. The genetic map was evaluated for its effectiveness and efficiency in QTL mapping and candidate gene identification. A major QTL for plant height was mapped at 105.5 cM on chromosome 3H. This QTL with LOD value of 13.01 explained 44.5% of phenotypic variation. This strategy will enable rapid and efficient establishment of high-density genetic maps in other species.
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