Evidence map›Paper›PMID 26181812›Full record

ArticleJournal of acquired immune deficiency syndromes (1999)2015

The Kynurenine Pathway of Tryptophan Catabolism and AIDS-Associated Kaposi Sarcoma in Africa.

Helen Byakwaga, Peter W Hunt, Miriam Laker-Oketta, David V Glidden, Yong Huang, Bosco M Bwana, A Rain Mocello, John Bennett, Victoria Walusansa, Sheila C Dollard and 3 more

Open access · greenAbstract read
In one paragraph

Article in Journal of acquired immune deficiency syndromes (1999), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Kaposi sarcoma.Nature reviews. Disease primers · 2019
    Review
  12. Article
  13. Review
  14. Article
  15. Role of immune activation in progression to AIDS.Current opinion in HIV and AIDS · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 2 countries.

Helen Byakwaga*Mbarara University of Science and Technology, Mbarara, Uganda; †University of California, San Francisco, CA; ‡Infectious Diseases Institute, Kampala, Uganda; §Uganda Cancer Institute, Kampala, Uganda; ‖Centers for Disease Control and Prevention, Atlanta, GA; ¶Massachusetts General Hospital, Center for Global Health, Harvard Medical School, Boston, MA; and #Uganda Virus Research Institute, Entebbe, Uganda.
Peter W Hunt
Miriam Laker-Oketta
David V Glidden
Yong Huang
Bosco M Bwana
A Rain Mocello
John Bennett
Victoria Walusansa
Sheila C Dollard
David R Bangsberg
Edward K Mbidde
Jeffrey N Martin
University of California, San Francisco · USCenter for Global Health · USCenters for Disease Control and Prevention · USMbarara University of Science and Technology · UGUganda Cancer Institute · UGUganda Virus Research Institute · UG

Funding

Virology CoreP30AI027763 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STEVEN Grant DEEKS · 1988 to 2026
$93.6M
East Africa International Epidemiology Database to evaluate AIDS (IeDEA) Regional ConsortiumU01AI069911 · NIAID · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI AGGREY SEMWENDERO SEMEERE, Kara Kay Wools-Kaloustian · 2006 to 2026
$57.7M
AIDS and Cancer Specimen Resource (ACSR)UM1CA181255 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Jeffrey Michael Bethony, Anna Coghill · 2013 to 2026
$56.7M
West Coast AIDS and Cancer Specimen Resource (ACSR)U01CA066529 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MCGRATH, MICHAEL SHANNON · 1994 to 2012
$16.1M
University of California Launching Future Leaders in Global Health Research Training ProgramD43TW009343 · FIC · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CRAIG R COHEN, Sung-Jae Lee · 2017 to 2026
$14.7M
University of California Global Health Institute Program for Fellows and ScholarsR25TW009343 · FIC · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI COHEN, CRAIG R, STRATHDEE, STEFFANIE A. · 2012 to 2017
$6.4M
Uganda-UCSF Research Training in HIV-Associated MalignanciesD43CA153717 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MARTIN, JEFFREY N · 2010 to 2013
$1.9M
Antiretroviral Therapy of AIDS-Related Kaposi's Sarcoma in AfricaR01CA119903 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MARTIN, JEFFREY N · 2005 to 2009
$1.9M
IDO-induced Tryptophan Catabolism and Mortality in Treated HIV-infected AfricansR56AI100765 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HUNT, PETER W · 2012 to 2012
$450k
Innate Immune Response Genetics and T cell Activation in Treated HIV InfectionR21AI078774 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HUNT, PETER W · 2009 to 2010
$414k
FIC NIH HHS D43 TW009343FIC NIH HHS R25 TW009343NCI NIH HHS D43 CA153717NCI NIH HHS R01 CA119903NCI NIH HHS U01 CA066529NCI NIH HHS UM1 CA181255NIAID NIH HHS P30 AI027763NIAID NIH HHS R21 AI078774NIAID NIH HHS R56 AI100765NIAID NIH HHS U01 AI069911NIMH NIH HHS R01 MH054097
6 · The paper itself

Abstract

backgroundOther than Kaposi sarcoma (KS)-associated herpesvirus and CD4 T-cell lymphopenia, the mechanisms responsible for KS in the context of HIV are poorly understood. One recently explored pathway of HIV pathogenesis involves induction of the enzyme indoleamine 2,3-dioxygenase-1 (IDO), which catabolizes tryptophan into kynurenine and several other immunologically active metabolites that suppress T-cell proliferation. We investigated the role of IDO in the development of KS in HIV disease.

methodsIn a case-control study among untreated HIV-infected Ugandans, cases were adults with KS and controls were without KS. IDO activity was assessed by the ratio of plasma kynurenine to tryptophan levels (KT ratio), measured by liquid chromatography-tandem mass spectrometry.

resultsWe studied 631 HIV-infected subjects: 222 KS cases and 409 controls. Non-KS controls had a higher median plasma KT ratio (130, interquartile range: 90 to 190 nM/μM) than KS cases (110, interquartile range: 90 to 150 nM/μM) (P = 0.004). After adjustment for age, sex, CD4 count, and plasma HIV RNA level, subjects with the highest (fourth quartile) plasma KT ratios had a 59% reduction (95% confidence interval: 27% to 77%) in the odds of KS compared with those with the lowest (first quartile) levels. KS was also independently associated with lower CD4 count, higher plasma HIV RNA, and men.

conclusionsAmong HIV-infected individuals, greater activity of the kynurenine pathway of tryptophan catabolism, as evidenced by higher levels of plasma KT ratio, was associated with lower occurrence of KS. Some consequences of immune activation in HIV infection might actually suppress certain cancers.

Indexed as

AdultAIDS-Related Opportunistic InfectionsFemaleGene Expression Regulation, EnzymologicHumansIndoleamine-Pyrrole 2,3,-DioxygenaseKynurenineMalariaMaleRNA, ViralSarcoma, KaposiTryptophanTuberculosisViral LoadIndoleamine-Pyrrole 2,3,-DioxygenaseKynurenineRNA, ViralTryptophan

Identifiers

PMID26181812
PMCPMC4607630
OpenAlexW2425757211

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.