Evidence map›Paper›PMID 26181590›Full record

ArticleACS chemical biology2015

Small Molecule Inhibition of miR-544 Biogenesis Disrupts Adaptive Responses to Hypoxia by Modulating ATM-mTOR Signaling.

Christopher L Haga, Sai Pradeep Velagapudi, Jacqueline R Strivelli, Wang-Yong Yang, Matthew D Disney, Donald G Phinney

Abstract read
In one paragraph

Article in ACS chemical biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Graph neural networks for the identification of novel inhibitors of a small RNA.SLAS discovery : advancing life sciences R & D · 2023
    Article
  3. Review
  4. Hypoxia-driven ncRNAs in breast cancer.Frontiers in oncology · 2023
    Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Review
  11. Review
  12. Therapeutic Targeting of MicroRNAs in the Tumor Microenvironment.International journal of molecular sciences · 2021
    Review
  13. Article
  14. Review
  15. How We Think about Targeting RNA with Small Molecules.Journal of medicinal chemistry · 2020
    Article
  16. Target-Directed Approaches for Screening Small Molecules against RNA Targets.SLAS discovery : advancing life sciences R & D · 2020
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Christopher L HagaDepartment of Molecular Therapeutics, The Scripps Research Institute, Scripps Florida , Jupiter, Florida 33458, United States.
Sai Pradeep VelagapudiDepartment of Chemistry, The Scripps Research Institute, Scripps Florida , Jupiter, Florida 33458, United States.
Jacqueline R StrivelliDepartment of Molecular Therapeutics, The Scripps Research Institute, Scripps Florida , Jupiter, Florida 33458, United States.
Wang-Yong YangDepartment of Chemistry, The Scripps Research Institute, Scripps Florida , Jupiter, Florida 33458, United States.
Matthew D DisneyDepartment of Chemistry, The Scripps Research Institute, Scripps Florida , Jupiter, Florida 33458, United States.
Donald G PhinneyDepartment of Molecular Therapeutics, The Scripps Research Institute, Scripps Florida , Jupiter, Florida 33458, United States.
Scripps Research Institute · US

Funding

Sequence-based Design of Small Molecules Targeting RNAR01GM097455 · NIGMS · SCRIPPS FLORIDA · PI DISNEY, MATTHEW D · 2012 to 2019
$4.6M
NIGMS NIH HHS 1R01GM097455NIGMS NIH HHS 1R01GM097455-S1NIGMS NIH HHS R01 GM097455
6 · The paper itself

Abstract

Hypoxia induces a complex circuit of gene expression that drives tumor progression and increases drug resistance. Defining these changes allows for an understanding of how hypoxia alters tumor biology and informs design of lead therapeutics. We probed the role of microRNA-544 (miR-544), which silences mammalian target of rapamycin (mTOR), in a hypoxic breast cancer model by using a small molecule (1) that selectively impedes the microRNA's biogenesis. Application of 1 to hypoxic tumor cells selectively inhibited production of the mature microRNA, sensitized cells to 5-fluorouracil, and derepressed mRNAs affected by miR-544 in cellulo and in vivo, including boosting mTOR expression. Thus, small molecule inhibition of miR-544 reverses a tumor cell's physiological response to hypoxia. Importantly, 1 sensitized tumor cells to hypoxia-associated apoptosis at a 25-fold lower concentration than a 2'-O-methyl RNA antagomir and was as selective. Further, the apoptotic effect of 1 was suppressed by treatment of cell with rapamycin, a well-known inhibitor of the mTOR signaling pathway, illustrating the selectivity of the compound. Thus, RNA-directed chemical probes, which could also serve as lead therapeutics, enable interrogation of complex cellular networks in cells and animals.

Indexed as

AnimalsAntineoplastic AgentsAtaxia Telangiectasia Mutated ProteinsCell Line, TumorCell SurvivalDrug Evaluation, PreclinicalGene Expression RegulationHypoxiaMiceMicroRNAsNeoplasmsReal-Time Polymerase Chain ReactionSignal TransductionSmall Molecule LibrariesTOR Serine-Threonine KinasesAntineoplastic AgentsAtaxia Telangiectasia Mutated ProteinsAtm protein, mouseMicroRNAsMIRN-544 microRNA, mousemTOR protein, mouseSmall Molecule LibrariesTOR Serine-Threonine Kinases

Identifiers

PMID26181590
PMCPMC4876818
OpenAlexW2400948241

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.