Evidence map›Paper›PMID 26181301›Full record

ArticleAmerican journal of respiratory cell and molecular biology2016

Aberrant DNA Methylation of Phosphodiesterase [corrected] 4D Alters Airway Smooth Muscle Cell Phenotypes.

Amanda H Y Lin, Yan Shang, Wayne Mitzner, James S K Sham, Wan-yee Tang

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in American journal of respiratory cell and molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Role of Isocitrate Dehydrogenase 2 on DNA Hydroxymethylation in Human Airway Smooth Muscle Cells.American journal of respiratory cell and molecular biology · 2020
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Amanda H Y Lin1 Division of Pulmonary and Critical Care Medicine, Johns Hopkins University, Baltimore, Maryland; and.
Yan Shang2 Department of Environmental Health Sciences, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
Wayne Mitzner2 Department of Environmental Health Sciences, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
James S K Sham1 Division of Pulmonary and Critical Care Medicine, Johns Hopkins University, Baltimore, Maryland; and.
Wan-yee Tang2 Department of Environmental Health Sciences, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
Johns Hopkins University · US

Funding

THE INTEGRATED FUNCTION OF RESPIRATION &CIRCULATIONP01HL010342 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI MITZNER, WAYNE · 1985 to 2015
$24.4M
TET1-mediated 5-hydroxymethylcytosine modification & airway hyperresponsivenessR01ES024784 · NIEHS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI TANG, WAN-YEE · 2015 to 2019
$1.7M
Estrogens/Xenoestrogens and Epigenetic Regulation of Gene ExpressionR00ES016817 · NIEHS · JOHNS HOPKINS UNIVERSITY · PI TANG, WAN-YEE · 2010 to 2012
$747k
NHLBI NIH HHS HL10342NHLBI NIH HHS P01 HL010342NIEHS NIH HHS ES016887NIEHS NIH HHS R01 ES024784
6 · The paper itself

Abstract

Airway hyperresponsiveness (AHR) is a hallmark feature in asthma characterized by exaggerated airway contractile response to stimuli due to increased airway sensitivity and chronic airway remodeling. We have previously shown that allergen-induced AHR in mice is associated with aberrant DNA methylation in the lung genome, suggesting that AHR could be epigenetically regulated, and these changes might predispose the animals to asthma. Previous studies demonstrated that overexpression of phosphodiesterase 4D (PDE4D) is associated with increased AHR. However, epigenetic regulation of this gene in asthmatic airway smooth muscle cells (ASMCs) has not been examined. In this study, we aimed to examine the relationship between epigenetic regulation of PDE4D and ASMC phenotypes. We identified CpG site-specific hypomethylation at PDE4D promoter in human asthmatic ASMCs. We next used methylated oligonucleotides to introduce CpG site-specific methylation at PDE4D promoter and examined its effect on ASMCs. We showed that PDE4D methylation decreased cell proliferation and migration of asthmatic ASMCs. We further elucidated that methylated PDE4D decreased PDE4D expression in asthmatic ASMCs, increased cAMP level, and inhibited the aberrant increase in Ca(2+) level. Moreover, PDE4D methylation reduced the phosphorylation level of downstream effectors of Ca(2+) signaling, including myosin light chain kinase and p38. Taken together, our findings demonstrate that gene-specific epigenetic changes may predispose ASMCs to asthma through alterations in cell phenotypes. Modulation of ASMC phenotypes by methylated PDE4D oligonucleotides can reverse the aberrant ASMC functions to normal phenotypes. This has provided new insight to the development of novel therapeutic options for this debilitative disease.

Indexed as

DNA MethylationEpigenesis, GeneticAirway RemodelingAsthmaCalciumCase-Control StudiesCell MovementCell ProliferationCells, CulturedCpG IslandsCyclic AMPCyclic Nucleotide Phosphodiesterases, Type 4Genetic Association StudiesGenetic Predisposition to DiseaseHumansMyocytes, Smooth MuscleCalciumCyclic AMPCyclic Nucleotide Phosphodiesterases, Type 4Myosin-Light-Chain Kinasep38 Mitogen-Activated Protein KinasesPDE4D protein, humanairway hyperresponsivenessairway smooth muscle cellDNA methylationmethylated DNA oligonucleotidesphosphodiesterase 4D

Identifiers

PMID26181301
PMCPMC4821043
OpenAlexW1923486549

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.