Evidence map›Paper›PMID 26179916›Full record

ArticleMolecular biology of the cell2015

Conservation of inner nuclear membrane targeting sequences in mammalian Pom121 and yeast Heh2 membrane proteins.

Annemarie Kralt, Noorjahan B Jagalur, Vincent van den Boom, Ravi K Lokareddy, Anton Steen, Gino Cingolani, Maarten Fornerod, Liesbeth M Veenhoff

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Structure and Function of the Nuclear Pore Complex.Cold Spring Harbor perspectives in biology · 2022
    Review
  3. Article
  4. Article
  5. Nucleoporins in cardiovascular disease.Journal of molecular and cellular cardiology · 2020
    Review
  6. Article
  7. The Structure of the Nuclear Pore Complex (An Update).Annual review of biochemistry · 2019
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Annemarie KraltEuropean Research Institute for the Biology of Ageing, University of Groningen, University Medical Center Groningen, 9713 AV Groningen, Netherlands.
Noorjahan B JagalurDepartments of Biochemistry and Pediatric Oncology, Erasmus MC/Sophia, 3015 CN Rotterdam, Netherlands.
Vincent van den BoomDepartment of Experimental Hematology, University Medical Center Groningen, University of Groningen, 9700 RB Groningen, Netherlands.
Ravi K LokareddyDepartment of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA 19107.
Anton SteenEuropean Research Institute for the Biology of Ageing, University of Groningen, University Medical Center Groningen, 9713 AV Groningen, Netherlands.
Gino CingolaniDepartment of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA 19107.
Maarten FornerodDepartments of Biochemistry and Pediatric Oncology, Erasmus MC/Sophia, 3015 CN Rotterdam, Netherlands.
Liesbeth M VeenhoffEuropean Research Institute for the Biology of Ageing, University of Groningen, University Medical Center Groningen, 9713 AV Groningen, Netherlands l.m.veenhoff@rug.nl).
Erasmus MC - Sophia Children’s Hospital · NLThomas Jefferson University · USUniversity Medical Center Groningen · NLUniversity of Groningen · NL

Funding

X-Ray Crystallography and Macromolecular CharacterizationP30CA056036 · NCI · THOMAS JEFFERSON UNIVERSITY · PI Andrew Chapman · 1995 to 2026
$94.8M
Molecular Basis for Recognition and Nuclear Import of Non-classical NLS CargosR01GM074846 · NIGMS · UPSTATE MEDICAL UNIVERSITY · PI CINGOLANI, GINO · 2006 to 2010
$1.3M
A NEW HYBRID DIFFRACTOMETER FOR MACROMOLECULAR CRYSTALLOGRAPHY AND SAXS AT TJUS10OD017987 · OD · THOMAS JEFFERSON UNIVERSITY · PI CINGOLANI, GINO · 2014 to 2014
$600k
NCI NIH HHS P30 CA056036NCI NIH HHS P30CA56036NIGMS NIH HHS GM074846-01A1NIGMS NIH HHS R01 GM074846NIH HHS S10 OD017987
6 · The paper itself

Abstract

Endoplasmic reticulum-synthesized membrane proteins traffic through the nuclear pore complex (NPC) en route to the inner nuclear membrane (INM). Although many membrane proteins pass the NPC by simple diffusion, two yeast proteins, ScSrc1/ScHeh1 and ScHeh2, are actively imported. In these proteins, a nuclear localization signal (NLS) and an intrinsically disordered linker encode the sorting signal for recruiting the transport factors for FG-Nup and RanGTP-dependent transport through the NPC. Here we address whether a similar import mechanism applies in metazoans. We show that the (putative) NLSs of metazoan HsSun2, MmLem2, HsLBR, and HsLap2β are not sufficient to drive nuclear accumulation of a membrane protein in yeast, but the NLS from RnPom121 is. This NLS of Pom121 adapts a similar fold as the NLS of Heh2 when transport factor bound and rescues the subcellular localization and synthetic sickness of Heh2ΔNLS mutants. Consistent with the conservation of these NLSs, the NLS and linker of Heh2 support INM localization in HEK293T cells. The conserved features of the NLSs of ScHeh1, ScHeh2, and RnPom121 and the effective sorting of Heh2-derived reporters in human cells suggest that active import is conserved but confined to a small subset of INM proteins.

Indexed as

Active Transport, Cell NucleusAmino Acid SequenceAnimalsCells, CulturedEndoplasmic ReticulumHEK293 CellsHumansMembrane GlycoproteinsMembrane ProteinsMiceNuclear EnvelopeNuclear Localization SignalsNuclear PoreNuclear ProteinsProtein Structure, TertiaryHeh2 protein, S cerevisiaeMembrane GlycoproteinsMembrane ProteinsNuclear Localization SignalsNuclear ProteinsPOM121 protein, human

Identifiers

PMID26179916
PMCPMC4569319
OpenAlexW1880934687

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.