Evidence map›Paper›PMID 26179914›Full record

ArticleMolecular biology of the cell2015

Contributions of epsinR and gadkin to clathrin-mediated intracellular trafficking.

Jennifer Hirst, James R Edgar, Georg H H Borner, Sam Li, Daniela A Sahlender, Robin Antrobus, Margaret S Robinson

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Protein sorting from endosomes to the TGN.Frontiers in cell and developmental biology · 2023
    Review
  6. Article
  7. Article
  8. Article
  9. An in vitro vesicle formation assay reveals cargo clients and factors that mediate vesicular trafficking.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Visualization of Protein Sorting at theFrontiers in cell and developmental biology · 2019
    Article
  16. Article
  17. Light-activated protein interaction with high spatial subcellular confinement.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jennifer HirstCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, United Kingdom.
James R EdgarCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, United Kingdom.
Georg H H BornerCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, United Kingdom.
Sam LiMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, United Kingdom.
Daniela A SahlenderCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, United Kingdom.
Robin AntrobusCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, United Kingdom.
Margaret S RobinsonCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, United Kingdom.
University of Cambridge · GBMRC Laboratory of Molecular Biology · GB

Funding

Wellcome Trust 086598Wellcome Trust 100140
6 · The paper itself

Abstract

The precise functions of most of the proteins that participate in clathrin-mediated intracellular trafficking are unknown. We investigated two such proteins, epsinR and gadkin, using the knocksideways method, which rapidly depletes proteins from the available pool by trapping them onto mitochondria. Although epsinR is known to be an N-ethylmaleimide-sensitive factor attachment protein receptor (SNARE)-specific adaptor, the epsinR knocksideways blocked the production of the entire population of intracellular clathrin-coated vesicles (CCVs), suggesting a more global function. Using the epsinR knocksideways data, we were able to estimate the copy number of all major intracellular CCV proteins. Both sides of the vesicle are densely covered, indicating that CCVs sort their cargo by molecular crowding. Trapping of gadkin onto mitochondria also blocked the production of intracellular CCVs but by a different mechanism: vesicles became cross-linked to mitochondria and pulled out toward the cell periphery. Both phenotypes provide new insights into the regulation of intracellular CCV formation, which could not have been found using more conventional approaches.

Indexed as

Adaptor Proteins, Vesicular TransportClathrinClathrin-Coated VesiclesEndosomesHeLa CellsHumansMembrane ProteinsN-Ethylmaleimide-Sensitive ProteinsProtein BindingProtein TransportSubcellular FractionsAdaptor Proteins, Vesicular TransportAP1AR protein, humanClathrinCLINT1 protein, humanMembrane ProteinsN-Ethylmaleimide-Sensitive Proteins

Identifiers

PMID26179914
PMCPMC4551321
OpenAlexW2167318209

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.