Evidence map›Paper›PMID 26178529›Full record

ArticleHuman mutation2015

GenomeConnect: matchmaking between patients, clinical laboratories, and researchers to improve genomic knowledge.

Brianne E Kirkpatrick, Erin Rooney Riggs, Danielle R Azzariti, Vanessa Rangel Miller, David H Ledbetter, David T Miller, Heidi Rehm, Christa Lese Martin, W Andrew Faucett, ClinGen Resource

Open access · bronzeAbstract read
In one paragraph

Article in Human mutation, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
7.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 73 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. The Brain Gene Registry: a data snapshot.Journal of neurodevelopmental disorders · 2024
    Article
  7. Review
  8. Article
  9. Clinical variants paired with phenotype: A rich resource for brain gene curation.Genetics in medicine : official journal of the American College of Medical Genetics · 2024
    Article
  10. Clinical validity assessment of genes frequently tested on intellectual disability/autism sequencing panels.Genetics in medicine : official journal of the American College of Medical Genetics · 2022
    Article
  11. Article
  12. A clinician's guide to omics resources in dermatology.Clinical and experimental dermatology · 2022
    Review
  13. Article
  14. Article
  15. Recontacting registry participants with genetic updates through GenomeConnect, the ClinGen patient registry.Genetics in medicine : official journal of the American College of Medical Genetics · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Brianne E KirkpatrickGeisinger Health System, Danville, Pennsylvania.
Erin Rooney RiggsGeisinger Health System, Danville, Pennsylvania.
Danielle R AzzaritiLaboratory for Molecular Medicine, Partners Personalized Medicine, Boston, Massachusetts.
Vanessa Rangel MillerPatientCrossroads, San Mateo, California.
David H LedbetterGeisinger Health System, Danville, Pennsylvania.
David T MillerDivision of Genetics and Genomics, Boston Children's Hospital, Boston, Massachusetts.
Heidi RehmLaboratory for Molecular Medicine, Partners Personalized Medicine, Boston, Massachusetts.
Christa Lese MartinGeisinger Health System, Danville, Pennsylvania.
W Andrew FaucettGeisinger Health System, Danville, Pennsylvania.
ClinGen Resource
Geisinger Health System · USBoston Children's Hospital · USBrigham and Women's Hospital · USMass General Brigham · US

Funding

Resource ProjectU41HG006834 · NHGRI · BRIGHAM AND WOMEN'S HOSPITAL · PI REHM, HEIDI L · 2013 to 2020
$26.9M
Clinically Relevant Genome Variation DatabaseU01HG007436 · NHGRI · STANFORD UNIVERSITY · PI BUSTAMANTE, CARLOS DANIEL, PLON, SHARON E. · 2013 to 2016
$10.5M
A Knowledge Base for Clinically Relevant Genes and VariantsU01HG007437 · NHGRI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BERG, JONATHAN S, EVANS, JAMES PHILIP · 2013 to 2016
$9.0M
CCR NIH HHS HHSN261200800001CIntramural NIH HHSNCI NIH HHS HHSN261200800001ENHGRI NIH HHS 1U01HG007436-01NHGRI NIH HHS 1U01HG007437-01NHGRI NIH HHS 1U41HG006834-01A1NHGRI NIH HHS U01 HG007436NHGRI NIH HHS U01 HG007437NHGRI NIH HHS U41 HG006834
6 · The paper itself

Abstract

As the utility of genetic and genomic testing in healthcare grows, there is need for a high-quality genomic knowledge base to improve the clinical interpretation of genomic variants. Active patient engagement can enhance communication between clinicians, patients, and researchers, contributing to knowledge building. It also encourages data sharing by patients and increases the data available for clinicians to incorporate into individualized patient care, clinical laboratories to utilize in test interpretation, and investigators to use for research. GenomeConnect is a patient portal supported by the Clinical Genome Resource (ClinGen), providing an opportunity for patients to add to the knowledge base by securely sharing their health history and genetic test results. Data can be matched with queries from clinicians, laboratory personnel, and researchers to better interpret the results of genetic testing and build a foundation to support genomic medicine. Participation is online, allowing patients to contribute regardless of location. GenomeConnect supports longitudinal, detailed clinical phenotyping and robust "matching" among research and clinical communities. Phenotype data are gathered using online health questionnaires; genotype data are obtained from genetic test reports uploaded by participants and curated by staff. GenomeConnect empowers patients to actively participate in the improvement of genomic test interpretation and clinical utility.

Indexed as

Databases, FactualDiseaseGenetic Predisposition to DiseaseGenome, HumanHumansInformation DisseminationPatient ParticipationPhenotypePrecision MedicineUser-Computer Interfacedata sharinggenotype/phenotypematchmaker exchangepatient portalpatient registry

Identifiers

PMID26178529
PMCPMC4575269
OpenAlexW1495905662

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.