Evidence map›Paper›PMID 26178010›Full record

ArticleScientific reports2015

Homo sapiens exhibit a distinct pattern of CNV genes regulation: an important role of miRNAs and SNPs in expression plasticity.

Harsh Dweep, Nada Kubikova, Norbert Gretz, Konstantinos Voskarides, Kyriacos Felekkis

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. RBPTD: a database of cancer-related RNA-binding proteins in humans.Database : the journal of biological databases and curation · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Harsh DweepMedical Research Center, University of Heidelberg, Mannheim, Germany.
Nada KubikovaDepartment of Life and Health Sciences, University of Nicosia, Nicosia Cyprus.
Norbert GretzMedical Research Center, University of Heidelberg, Mannheim, Germany.
Konstantinos VoskaridesMolecular Medicine Research Center and Department of Biological Sciences, University of Cyprus, Nicosia, Cyprus.
Kyriacos Felekkis1] Department of Life and Health Sciences, University of Nicosia, Nicosia Cyprus [2] St. George's University of London Medical Program offered at the University of Nicosia Medical School, Nicosia, Cyprus.
Heidelberg University · DEUniversity of Nicosia · CYUniversity of Cyprus · CY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gene expression regulation is a complex and highly organized process involving a variety of genomic factors. It is widely accepted that differences in gene expression can contribute to the phenotypic variability between species, and that their interpretation can aid in the understanding of the physiologic variability. CNVs and miRNAs are two major players in the regulation of expression plasticity and may be responsible for the unique phenotypic characteristics observed in different lineages. We have previously demonstrated that a close interaction between these two genomic elements may have contributed to the regulation of gene expression during evolution. This work presents the molecular interactions between CNV and non CNV genes with miRNAs and other genomic elements in eight different species. A comprehensive analysis of these interactions indicates a unique nature of human CNV genes regulation as compared to other species. By using genes with short 3' UTR that abolish the "canonical" miRNA-dependent regulation, as a model, we demonstrate a distinct and tight regulation of human genes that might explain some of the unique features of human physiology. In addition, comparison of gene expression regulation between species indicated that there is a significant difference between humans and mice possibly questioning the effectiveness of the latest as experimental models of human diseases.

Indexed as

Gene Expression RegulationPolymorphism, Single Nucleotide3' Untranslated RegionsDNA Copy Number VariationsHumansMicroRNAs3' Untranslated RegionsMicroRNAs

Identifiers

PMID26178010
PMCPMC4503977
OpenAlexW2267448744

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.