Evidence map›Paper›PMID 26177520›Full record

ArticlePloS one2015

Predisposition to Childhood Otitis Media and Genetic Polymorphisms within the Toll-Like Receptor 4 (TLR4) Locus.

Lena Hafrén, Elisabet Einarsdottir, Erna Kentala, Sari Hammarén-Malmi, Mahmood F Bhutta, Carol J MacArthur, Beth Wilmot, Margaretha Casselbrant, Yvette P Conley, Daniel E Weeks and 8 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 2 pooled it
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 2 syntheses or guidelines pooled it, 37 citations in OpenAlex.

  1. A Systematic Review and Meta-Analysis of the Efficacy of Antimicrobial Chemoprophylaxis for Recurrent Acute Otitis Media in Children.Clinical otolaryngology : official journal of ENT-UK ; official journal of Netherlands Society for Oto-Rhino-Laryngology & Cervico-Facial Surgery · 2025
    Pooled it
  2. Dysregulation of immune response in otitis media.Expert reviews in molecular medicine · 2021
    Pooled it
  3. Review
  4. Review
  5. Article
  6. Review
  7. Toll-Like Receptors: Expression and Roles in Otitis Media.International journal of molecular sciences · 2021
    Review
  8. Article
  9. Innate Immunity in the Middle Ear Mucosa.Frontiers in cellular and infection microbiology · 2021
    Review
  10. Review
  11. Review
  12. Panel 2- recent advance in otitis media bioinformatics.International journal of pediatric otorhinolaryngology · 2020
    Review
  13. Panel 8: Vaccines and immunology.International journal of pediatric otorhinolaryngology · 2020
    Review
  14. Review
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 9 institutions in 4 countries.

Lena HafrénDepartment of Otorhinolaryngology, Helsinki University Central Hospital, Helsinki, Finland.
Elisabet EinarsdottirDepartment of Biosciences and Nutrition, Center for Innovative Medicine, Karolinska Institutet, Huddinge, Sweden.
Erna KentalaDepartment of Otorhinolaryngology, Helsinki University Central Hospital, Helsinki, Finland.
Sari Hammarén-MalmiDepartment of Otorhinolaryngology, Helsinki University Central Hospital, Helsinki, Finland.
Mahmood F BhuttaUCL Ear Institute, London, United Kingdom.
Carol J MacArthurDepartment of Otolaryngology, Head & Neck Surgery, Oregon Health & Science University, Portland, Oregon, United States of America.
Beth WilmotOregon Clinical and Translational Research Institute and Division of Bioinformatics and Computational Biology, Oregon Health & Science University, Portland, Oregon, United States of America.
Margaretha CasselbrantDepartment of Otolaryngology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America.
Yvette P ConleyDepartment of Nursing and Human Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.
Daniel E WeeksDepartment of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.
Ellen M MandelDepartment of Otolaryngology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America.
Outi VaaralaInstitute of Clinical Medicine, University of Helsinki, Helsinki, Finland.
Anna KallioDepartment of Vaccination and Immune Protection, National Institute for Health and Welfare (THL), Helsinki, Finland.
Merit MelinDepartment of Vaccination and Immune Protection, National Institute for Health and Welfare (THL), Helsinki, Finland.
Janne K NieminenDepartment of Vaccination and Immune Protection, National Institute for Health and Welfare (THL), Helsinki, Finland.
Eira LeinonenMolecular Neurology Research Program, University of Helsinki and Folkhälsan Institute of Genetics, Helsinki, Finland.
Juha KereDepartment of Biosciences and Nutrition, Center for Innovative Medicine, Karolinska Institutet, Huddinge, Sweden; Molecular Neurology Research Program, University of Helsinki and Folkhälsan Institute of Genetics, Helsinki, Finland.
Petri S MattilaDepartment of Otorhinolaryngology, Helsinki University Central Hospital, Helsinki, Finland.
Helsinki University Hospital · FIUniversity of Pittsburgh · USFinnish Institute for Health and Welfare · FIUniversity of Helsinki · FIFolkhälsans Forskningscentrum · FIKarolinska Institutet · SEOregon Clinic · USOregon Health & Science University · USUniversity College London · GB

Funding

University of Pittsburgh Clinical and Translational Science InstituteUL1TR000005 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2012 to 2015
$50.8M
Oregon Clinical and Translational Research InstituteUL1TR000128 · NCATS · OREGON HEALTH & SCIENCE UNIVERSITY · PI ELLISON, DAVID H · 2012 to 2015
$28.7M
NCATS NIH HHS UL1 TR000128Wellcome Trust
6 · The paper itself

Abstract

backgroundPredisposition to childhood otitis media (OM) has a strong genetic component, with polymorphisms in innate immunity genes suspected to contribute to risk. Studies on several genes have been conducted, but most associations have failed to replicate in independent cohorts.

methodsWe investigated 53 gene polymorphisms in a Finnish cohort of 624 cases and 778 controls. A positive association signal was followed up in a tagging approach and tested in an independent Finnish cohort of 205 cases, in a British cohort of 1269 trios, as well as in two cohorts from the United States (US); one with 403 families and the other with 100 cases and 104 controls.

resultsIn the initial Finnish cohort, the SNP rs5030717 in the TLR4 gene region showed significant association (OR 1.33, P = .003) to OM. Tagging SNP analysis of the gene found rs1329060 (OR 1.33, P = .002) and rs1329057 (OR 1.29, P = .003) also to be associated. In the more severe phenotype the association was stronger. This finding was supported by an independent Finnish case cohort, but the associations failed to replicate in the British and US cohorts. In studies on TLR4 signaling in 20 study subjects, the three-marker risk haplotype correlated with a decreased TNFα secretion in myeloid dendritic cells.

conclusionsThe TLR4 gene locus, regulating the innate immune response, influences the genetic predisposition to childhood OM in a subpopulation of patients. Environmental factors likely modulate the genetic components contributing to the risk of OM.

Indexed as

Genetic Predisposition to DiseaseChildCohort StudiesDendritic CellsFinlandGene Expression RegulationGenetic Association StudiesHumansOtitis MediaPolymorphism, Single NucleotideReproducibility of ResultsRNA, MessengerToll-Like Receptor 4Tumor Necrosis Factor-alphaUnited KingdomUnited StatesRNA, MessengerTLR4 protein, humanToll-Like Receptor 4Tumor Necrosis Factor-alpha

Identifiers

PMID26177520
PMCPMC4503307
OpenAlexW1563674700

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.