Evidence map›Paper›PMID 26177303›Full record

ArticleInflammatory bowel diseases2015

Altered STAT4 Isoform Expression in Patients with Inflammatory Bowel Disease.

Rukhsana Jabeen, Lucy Miller, Weiguo Yao, Sandeep Gupta, Steven Steiner, Mark H Kaplan

Abstract read
In one paragraph

Article in Inflammatory bowel diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Rukhsana Jabeen*Department of Pediatrics, Indiana University School of Medicine, Indianapolis, Indiana; †Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, Indiana; and ‡Division of Pediatric Gastroenterology/Hepatology/Nutrition, Indiana University School of Medicine, Indianapolis, Indiana.
Lucy Miller
Weiguo Yao
Sandeep Gupta
Steven Steiner
Mark H Kaplan
Indiana University – Purdue University Indianapolis · USIndiana University School of Medicine

Funding

STAT4 IMMUNOLOGYR01AI045515 · NIAID · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI KAPLAN, MARK H · 1999 to 2014
$4.3M
NIAID NIH HHS R01 AI045515
6 · The paper itself

Abstract

backgroundCrohn's disease (CD) and ulcerative colitis (UC) are the major forms of inflammatory bowel disease, and pathogenesis involves a complex interplay among genetic, environmental, and immunological factors. We evaluated isoform expression of the IL-12-activated transcription factor STAT4 in children with CD and UC.

methodsWe collected biopsy samples from both patients newly diagnosed with CD and with UC. We further collected blood samples from patients newly diagnosed with CD and with UC as well as from patients who had a flare-up after being in clinical remission, and we examined the ratios of STAT4β/STAT4α mRNA. In addition to STAT4 isoforms, we measured the expression of the cytokines TNFα, IFNγ, granulocyte macrophage-colony stimulating factor, and IL-17 using polymerase chain reaction of biopsy samples and multiplex analysis of patient serum samples.

resultsRatios of STAT4β/STAT4α were increased in specific gastrointestinal tract segments in both patients with CD and those with UC that correlate with the location and severity of inflammation. In contrast, we did not observe changes in STAT4β/STAT4α ratios in biopsy specimens from patients with eosinophilic esophagitis. We also observed increased STAT4β/STAT4α ratios in the peripheral blood mononuclear cells of patients with UC and those with CD, compared with healthy controls. Ratios were normalized after patients were treated with steroids.

conclusionsCollectively, these data indicate that STAT4 isoforms could be an important noninvasive biomarker in the diagnosis and treatment of inflammatory bowel disease and that expression of these isoforms might provide further insight into the pathogenesis of IBD.

Indexed as

AdolescentBiomarkersBiopsyChildColitis, UlcerativeCrohn DiseaseCytokinesEosinophilic EsophagitisFemaleGastrointestinal TractHealthy VolunteersHumansLeukocytes, MononuclearMalePolymerase Chain ReactionProtein IsoformsBiomarkersCytokinesProtein IsoformsRNA, MessengerSTAT4 protein, humanSTAT4 Transcription Factor

Identifiers

PMID26177303
PMCPMC4567388
OpenAlexW2338997565

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.