Evidence map›Paper›PMID 26176554›Full record

ArticleCell cycle (Georgetown, Tex.)2015

Dysregulation of autophagy by HIV-1 Nef in human astrocytes.

A Sami Saribas, Kamel Khalili, Ilker Kudret Sariyer

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. HIV Protein Nef Induces Cardiomyopathy Through Induction of Bcl2 and p21.International journal of molecular sciences · 2024
    Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Emerging Role of Nef in the Development of HIV Associated Neurological Disorders.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2021
    Review
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

A Sami Saribasa Department of Neuroscience Center for Neurovirology ; Temple University School of Medicine ; Philadelphia , PA USA.
Kamel Khalilia Department of Neuroscience Center for Neurovirology ; Temple University School of Medicine ; Philadelphia , PA USA.
Ilker Kudret Sariyera Department of Neuroscience Center for Neurovirology ; Temple University School of Medicine ; Philadelphia , PA USA.
Temple University · US

Funding

Viral Gene Editing and Bioinformatics Core for Institution # 269291P30MH092177 · NIMH · TEMPLE UNIV OF THE COMMONWEALTH · PI SHOHREH AMINI · 2011 to 2026
$24.9M
Neuroimmune regulation of neurotropic JC virus by SF2/ASF in glial cellsR01AI101192 · NIAID · TEMPLE UNIV OF THE COMMONWEALTH · PI SARIYER, ILKER KUDRET · 2012 to 2016
$1.9M
BAG3 mediates interplay of HIV-1 and JCV in brainR01MH086358 · NIMH · TEMPLE UNIV OF THE COMMONWEALTH · PI KHALILI, KAMEL · 2009 to 2013
$1.7M
NIAID NIH HHS R01 AI101192NIMH NIH HHS P30 MH092177NIMH NIH HHS R01MH086358
6 · The paper itself

Abstract

Viruses often exploit autophagy, a common cellular process of degradation of damaged proteins, organelles, and pathogens, to avoid destruction. HIV-1 dysregulates this process in several cell types by means of Nef protein. Nef is a small HIV-1 protein which is expressed abundantly in astrocytes of HIV-1-infected brains and has been suggested to have a role in the pathogenesis of HIV-Associated Neurocognitive Disorders (HAND). In order to explore its effect in the CNS with respect to autophagy, HIV-1 Nef was expressed in primary human fetal astrocytes (PHFA) using an adenovirus vector (Ad-Nef). We observed that Nef expression triggered the accumulation of autophagy markers, ATG8/LC3 and p62 (SQSMT1). Similar results were obtained with Bafilomycin A1, an autophagy inhibitor which blocks the fusion of autophagosome to lysosome. Furthermore co-expression of tandem LC3 vector (mRFP-EGFP-LC3) and Ad-Nef in these cells produced mainly yellow puncta (mRFP+, EGFP+) strongly suggesting that autophagosome fusion to lysosome is blocked in PHFA cells in the presence of Nef. Together these data indicate that HIV-1 Nef mimics Bafilomycin A1 and blocks the last step of autophagy thereby helping HIV-1 virus to avoid autophagic degradation in human astrocytes.

Indexed as

AutophagyAdaptor Proteins, Signal TransducingAstrocytesAutophagy-Related Protein 8 FamilyBiomarkersHIV-1HumansMacrolidesMicrofilament ProteinsMicrotubule-Associated Proteinsnef Gene Products, Human Immunodeficiency VirusRNA-Binding ProteinsAdaptor Proteins, Signal TransducingAutophagy-Related Protein 8 Familybafilomycin A1BiomarkersGABARAPL2 protein, humanMacrolidesMAP1LC3A protein, humanMicrofilament ProteinsMicrotubule-Associated Proteinsnef Gene Products, Human Immunodeficiency Virusnef protein, Human immunodeficiency virus 1P62 protein, humanRNA-Binding ProteinsAdenovirusAstrocytesAutophagyCNSHIV-1 Nef

Identifiers

PMID26176554
PMCPMC4825552
OpenAlexW2126813435

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.