Evidence map›Paper›PMID 26175513›Full record

ArticlePlant physiology2015

Identification of Open Stomata1-Interacting Proteins Reveals Interactions with Sucrose Non-fermenting1-Related Protein Kinases2 and with Type 2A Protein Phosphatases That Function in Abscisic Acid Responses.

Rainer Waadt, Bianca Manalansan, Navin Rauniyar, Shintaro Munemasa, Matthew A Booker, Benjamin Brandt, Christian Waadt, Dmitri A Nusinow, Steve A Kay, Hans-Henning Kunz and 4 more

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed, 1 pooled it
14.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 1 synthesis or guideline pooled it, 90 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Review
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  15. Overexpression ofInternational journal of molecular sciences · 2022
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  16. Disentangling leaf-microbiome interactions inFrontiers in plant science · 2022
    Article
  17. Article
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  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 3 countries.

Rainer WaadtDivision of Biological Sciences, Cell and Developmental Biology Section, and Center for Food and Fuel for the 21st Century, University of California, San Diego, La Jolla, California 92093-0116 (R.W., B.M., S.M., B.B., H.-H.K., J.I.S.);Centre for Organismal Studies, Plant Developmental Biology, University of Heidelberg, 69120 Heidelberg, Germany (R.W., K.S.);Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037 (N.R., J.R.Y.);Division of Agricultural and Life Science, Graduate School of Environmental and Life Science, Okayama University, Okayama 7008530, Japan (S.M.);Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, Rhode Island 02912 (M.A.B., A.D.);Department of Biology, Donald Danforth Plant Science Center, St. Louis, Missouri 63132 (D.A.N.); andMolecular and Computational Biology Section, University of Southern California, Los Angeles, California 90089 (S.A.K.).
Bianca ManalansanDivision of Biological Sciences, Cell and Developmental Biology Section, and Center for Food and Fuel for the 21st Century, University of California, San Diego, La Jolla, California 92093-0116 (R.W., B.M., S.M., B.B., H.-H.K., J.I.S.);Centre for Organismal Studies, Plant Developmental Biology, University of Heidelberg, 69120 Heidelberg, Germany (R.W., K.S.);Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037 (N.R., J.R.Y.);Division of Agricultural and Life Science, Graduate School of Environmental and Life Science, Okayama University, Okayama 7008530, Japan (S.M.);Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, Rhode Island 02912 (M.A.B., A.D.);Department of Biology, Donald Danforth Plant Science Center, St. Louis, Missouri 63132 (D.A.N.); andMolecular and Computational Biology Section, University of Southern California, Los Angeles, California 90089 (S.A.K.).
Navin RauniyarDivision of Biological Sciences, Cell and Developmental Biology Section, and Center for Food and Fuel for the 21st Century, University of California, San Diego, La Jolla, California 92093-0116 (R.W., B.M., S.M., B.B., H.-H.K., J.I.S.);Centre for Organismal Studies, Plant Developmental Biology, University of Heidelberg, 69120 Heidelberg, Germany (R.W., K.S.);Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037 (N.R., J.R.Y.);Division of Agricultural and Life Science, Graduate School of Environmental and Life Science, Okayama University, Okayama 7008530, Japan (S.M.);Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, Rhode Island 02912 (M.A.B., A.D.);Department of Biology, Donald Danforth Plant Science Center, St. Louis, Missouri 63132 (D.A.N.); andMolecular and Computational Biology Section, University of Southern California, Los Angeles, California 90089 (S.A.K.).ORCID http://orcid.org/0000-0002-5297-7097
Shintaro MunemasaDivision of Biological Sciences, Cell and Developmental Biology Section, and Center for Food and Fuel for the 21st Century, University of California, San Diego, La Jolla, California 92093-0116 (R.W., B.M., S.M., B.B., H.-H.K., J.I.S.);Centre for Organismal Studies, Plant Developmental Biology, University of Heidelberg, 69120 Heidelberg, Germany (R.W., K.S.);Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037 (N.R., J.R.Y.);Division of Agricultural and Life Science, Graduate School of Environmental and Life Science, Okayama University, Okayama 7008530, Japan (S.M.);Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, Rhode Island 02912 (M.A.B., A.D.);Department of Biology, Donald Danforth Plant Science Center, St. Louis, Missouri 63132 (D.A.N.); andMolecular and Computational Biology Section, University of Southern California, Los Angeles, California 90089 (S.A.K.).
Matthew A BookerDivision of Biological Sciences, Cell and Developmental Biology Section, and Center for Food and Fuel for the 21st Century, University of California, San Diego, La Jolla, California 92093-0116 (R.W., B.M., S.M., B.B., H.-H.K., J.I.S.);Centre for Organismal Studies, Plant Developmental Biology, University of Heidelberg, 69120 Heidelberg, Germany (R.W., K.S.);Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037 (N.R., J.R.Y.);Division of Agricultural and Life Science, Graduate School of Environmental and Life Science, Okayama University, Okayama 7008530, Japan (S.M.);Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, Rhode Island 02912 (M.A.B., A.D.);Department of Biology, Donald Danforth Plant Science Center, St. Louis, Missouri 63132 (D.A.N.); andMolecular and Computational Biology Section, University of Southern California, Los Angeles, California 90089 (S.A.K.).
Benjamin BrandtDivision of Biological Sciences, Cell and Developmental Biology Section, and Center for Food and Fuel for the 21st Century, University of California, San Diego, La Jolla, California 92093-0116 (R.W., B.M., S.M., B.B., H.-H.K., J.I.S.);Centre for Organismal Studies, Plant Developmental Biology, University of Heidelberg, 69120 Heidelberg, Germany (R.W., K.S.);Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037 (N.R., J.R.Y.);Division of Agricultural and Life Science, Graduate School of Environmental and Life Science, Okayama University, Okayama 7008530, Japan (S.M.);Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, Rhode Island 02912 (M.A.B., A.D.);Department of Biology, Donald Danforth Plant Science Center, St. Louis, Missouri 63132 (D.A.N.); andMolecular and Computational Biology Section, University of Southern California, Los Angeles, California 90089 (S.A.K.).
Christian WaadtDivision of Biological Sciences, Cell and Developmental Biology Section, and Center for Food and Fuel for the 21st Century, University of California, San Diego, La Jolla, California 92093-0116 (R.W., B.M., S.M., B.B., H.-H.K., J.I.S.);Centre for Organismal Studies, Plant Developmental Biology, University of Heidelberg, 69120 Heidelberg, Germany (R.W., K.S.);Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037 (N.R., J.R.Y.);Division of Agricultural and Life Science, Graduate School of Environmental and Life Science, Okayama University, Okayama 7008530, Japan (S.M.);Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, Rhode Island 02912 (M.A.B., A.D.);Department of Biology, Donald Danforth Plant Science Center, St. Louis, Missouri 63132 (D.A.N.); andMolecular and Computational Biology Section, University of Southern California, Los Angeles, California 90089 (S.A.K.).
Dmitri A NusinowDivision of Biological Sciences, Cell and Developmental Biology Section, and Center for Food and Fuel for the 21st Century, University of California, San Diego, La Jolla, California 92093-0116 (R.W., B.M., S.M., B.B., H.-H.K., J.I.S.);Centre for Organismal Studies, Plant Developmental Biology, University of Heidelberg, 69120 Heidelberg, Germany (R.W., K.S.);Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037 (N.R., J.R.Y.);Division of Agricultural and Life Science, Graduate School of Environmental and Life Science, Okayama University, Okayama 7008530, Japan (S.M.);Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, Rhode Island 02912 (M.A.B., A.D.);Department of Biology, Donald Danforth Plant Science Center, St. Louis, Missouri 63132 (D.A.N.); andMolecular and Computational Biology Section, University of Southern California, Los Angeles, California 90089 (S.A.K.).ORCID http://orcid.org/0000-0002-0497-1723
Steve A KayDivision of Biological Sciences, Cell and Developmental Biology Section, and Center for Food and Fuel for the 21st Century, University of California, San Diego, La Jolla, California 92093-0116 (R.W., B.M., S.M., B.B., H.-H.K., J.I.S.);Centre for Organismal Studies, Plant Developmental Biology, University of Heidelberg, 69120 Heidelberg, Germany (R.W., K.S.);Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037 (N.R., J.R.Y.);Division of Agricultural and Life Science, Graduate School of Environmental and Life Science, Okayama University, Okayama 7008530, Japan (S.M.);Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, Rhode Island 02912 (M.A.B., A.D.);Department of Biology, Donald Danforth Plant Science Center, St. Louis, Missouri 63132 (D.A.N.); andMolecular and Computational Biology Section, University of Southern California, Los Angeles, California 90089 (S.A.K.).
Hans-Henning KunzDivision of Biological Sciences, Cell and Developmental Biology Section, and Center for Food and Fuel for the 21st Century, University of California, San Diego, La Jolla, California 92093-0116 (R.W., B.M., S.M., B.B., H.-H.K., J.I.S.);Centre for Organismal Studies, Plant Developmental Biology, University of Heidelberg, 69120 Heidelberg, Germany (R.W., K.S.);Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037 (N.R., J.R.Y.);Division of Agricultural and Life Science, Graduate School of Environmental and Life Science, Okayama University, Okayama 7008530, Japan (S.M.);Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, Rhode Island 02912 (M.A.B., A.D.);Department of Biology, Donald Danforth Plant Science Center, St. Louis, Missouri 63132 (D.A.N.); andMolecular and Computational Biology Section, University of Southern California, Los Angeles, California 90089 (S.A.K.).ORCID http://orcid.org/0000-0001-8000-0817
Karin SchumacherDivision of Biological Sciences, Cell and Developmental Biology Section, and Center for Food and Fuel for the 21st Century, University of California, San Diego, La Jolla, California 92093-0116 (R.W., B.M., S.M., B.B., H.-H.K., J.I.S.);Centre for Organismal Studies, Plant Developmental Biology, University of Heidelberg, 69120 Heidelberg, Germany (R.W., K.S.);Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037 (N.R., J.R.Y.);Division of Agricultural and Life Science, Graduate School of Environmental and Life Science, Okayama University, Okayama 7008530, Japan (S.M.);Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, Rhode Island 02912 (M.A.B., A.D.);Department of Biology, Donald Danforth Plant Science Center, St. Louis, Missouri 63132 (D.A.N.); andMolecular and Computational Biology Section, University of Southern California, Los Angeles, California 90089 (S.A.K.).
Alison DeLongDivision of Biological Sciences, Cell and Developmental Biology Section, and Center for Food and Fuel for the 21st Century, University of California, San Diego, La Jolla, California 92093-0116 (R.W., B.M., S.M., B.B., H.-H.K., J.I.S.);Centre for Organismal Studies, Plant Developmental Biology, University of Heidelberg, 69120 Heidelberg, Germany (R.W., K.S.);Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037 (N.R., J.R.Y.);Division of Agricultural and Life Science, Graduate School of Environmental and Life Science, Okayama University, Okayama 7008530, Japan (S.M.);Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, Rhode Island 02912 (M.A.B., A.D.);Department of Biology, Donald Danforth Plant Science Center, St. Louis, Missouri 63132 (D.A.N.); andMolecular and Computational Biology Section, University of Southern California, Los Angeles, California 90089 (S.A.K.).
John R YatesDivision of Biological Sciences, Cell and Developmental Biology Section, and Center for Food and Fuel for the 21st Century, University of California, San Diego, La Jolla, California 92093-0116 (R.W., B.M., S.M., B.B., H.-H.K., J.I.S.);Centre for Organismal Studies, Plant Developmental Biology, University of Heidelberg, 69120 Heidelberg, Germany (R.W., K.S.);Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037 (N.R., J.R.Y.);Division of Agricultural and Life Science, Graduate School of Environmental and Life Science, Okayama University, Okayama 7008530, Japan (S.M.);Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, Rhode Island 02912 (M.A.B., A.D.);Department of Biology, Donald Danforth Plant Science Center, St. Louis, Missouri 63132 (D.A.N.); andMolecular and Computational Biology Section, University of Southern California, Los Angeles, California 90089 (S.A.K.).ORCID http://orcid.org/0000-0001-5267-1672
Julian I SchroederDivision of Biological Sciences, Cell and Developmental Biology Section, and Center for Food and Fuel for the 21st Century, University of California, San Diego, La Jolla, California 92093-0116 (R.W., B.M., S.M., B.B., H.-H.K., J.I.S.);Centre for Organismal Studies, Plant Developmental Biology, University of Heidelberg, 69120 Heidelberg, Germany (R.W., K.S.);Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037 (N.R., J.R.Y.);Division of Agricultural and Life Science, Graduate School of Environmental and Life Science, Okayama University, Okayama 7008530, Japan (S.M.);Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, Rhode Island 02912 (M.A.B., A.D.);Department of Biology, Donald Danforth Plant Science Center, St. Louis, Missouri 63132 (D.A.N.); andMolecular and Computational Biology Section, University of Southern California, Los Angeles, California 90089 (S.A.K.) jischroeder@ucsd.edu.
Scripps Research Institute · USUniversity of California San Diego · USUniversity of Southern California · US

Funding

TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI MACCOSS, MICHAEL · 2012 to 2021
$20.7M
STRESS HORMONE SIGNAL TRANSDUCTION IN ARABIDOPSISR01GM060396 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SCHROEDER, JULIAN I · 2000 to 2023
$7.4M
TRAINING IN MOLECULAR &CELL BIOLOGY &BIOCHEMISTRYT32GM007601 · NIGMS · BROWN UNIVERSITY · PI MOWRY, KIMBERLY L. · 1985 to 2019
$6.4M
GENETIC ANALYSIS OF CIRCADIAN RHYTHMS IN ARABIDOPSISR01GM056006 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KAY, STEVE A, PRUNEDA-PAZ, JOSE L · 1996 to 2016
$6.0M
Molecular Mechanisms in the Arabidopsis Circadian ClockR01GM067837 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KAY, STEVE A · 2003 to 2015
$4.7M
Dissection of EARLY FLOWERING3 Function in the Arabidopsis Circadian ClockF32GM083585 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NUSINOW, DMITRI ANTON · 2008 to 2010
$149k
NIGMS NIH HHS F32 GM083585NIGMS NIH HHS F32GM083585NIGMS NIH HHS GM060396NIGMS NIH HHS P41 GM103533NIGMS NIH HHS R01 GM056006NIGMS NIH HHS R01GM056006NIGMS NIH HHS R01 GM060396NIGMS NIH HHS R01 GM067837NIGMS NIH HHS R01GM067837NIGMS NIH HHS T32 GM007601
6 · The paper itself

Abstract

The plant hormone abscisic acid (ABA) controls growth and development and regulates plant water status through an established signaling pathway. In the presence of ABA, pyrabactin resistance/regulatory component of ABA receptor proteins inhibit type 2C protein phosphatases (PP2Cs). This, in turn, enables the activation of Sucrose Nonfermenting1-Related Protein Kinases2 (SnRK2). Open Stomata1 (OST1)/SnRK2.6/SRK2E is a major SnRK2-type protein kinase responsible for mediating ABA responses. Arabidopsis (Arabidopsis thaliana) expressing an epitope-tagged OST1 in the recessive ost1-3 mutant background was used for the copurification and identification of OST1-interacting proteins after osmotic stress and ABA treatments. These analyses, which were confirmed using bimolecular fluorescence complementation and coimmunoprecipitation, unexpectedly revealed homo- and heteromerization of OST1 with SnRK2.2, SnRK2.3, OST1, and SnRK2.8. Furthermore, several OST1-complexed proteins were identified as type 2A protein phosphatase (PP2A) subunits and as proteins involved in lipid and galactolipid metabolism. More detailed analyses suggested an interaction network between ABA-activated SnRK2-type protein kinases and several PP2A-type protein phosphatase regulatory subunits. pp2a double mutants exhibited a reduced sensitivity to ABA during seed germination and stomatal closure and an enhanced ABA sensitivity in root growth regulation. These analyses add PP2A-type protein phosphatases as another class of protein phosphatases to the interaction network of SnRK2-type protein kinases.

Indexed as

Abscisic AcidArabidopsis ProteinsFluorescenceGerminationImmunoprecipitationMutationPlants, Genetically ModifiedProtein BindingProtein Interaction MapsProtein KinasesProtein MultimerizationProtein Phosphatase 2Protein Serine-Threonine KinasesProtein SubunitsReproducibility of ResultsTwo-Hybrid System TechniquesAbscisic AcidArabidopsis ProteinsOST1 protein, ArabidopsisProtein KinasesProtein Phosphatase 2Protein Serine-Threonine KinasesProtein SubunitsSnRK2 protein, Arabidopsis

Identifiers

PMID26175513
PMCPMC4577397
OpenAlexW2143285480

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