Evidence map›Paper›PMID 26175215›Full record

ArticleStem cells (Dayton, Ohio)2015

Genome-Wide MicroRNA and Gene Analysis of Mesenchymal Stem Cell Chondrogenesis Identifies an Essential Role and Multiple Targets for miR-140-5p.

Matt J Barter, Maria Tselepi, Rodolfo Gómez, Steven Woods, Wang Hui, Graham R Smith, Daryl P Shanley, Ian M Clark, David A Young

Open access · hybridAbstract read
In one paragraph

Article in Stem cells (Dayton, Ohio), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 109 citations in OpenAlex.

  1. Article
  2. Review
  3. Observational
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. The Role of MicroRNAs in the Pathophysiology of Osteoarthritis.International journal of molecular sciences · 2024
    Review
  12. Review
  13. Review
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Matt J BarterInstitute of Cellular Medicine, Newcastle University, Newcastle upon Tyne, United Kingdom.
Maria TselepiInstitute of Cellular Medicine, Newcastle University, Newcastle upon Tyne, United Kingdom.
Rodolfo GómezInstitute of Cellular Medicine, Newcastle University, Newcastle upon Tyne, United Kingdom.
Steven WoodsInstitute of Cellular Medicine, Newcastle University, Newcastle upon Tyne, United Kingdom.
Wang HuiInstitute of Cellular Medicine, Newcastle University, Newcastle upon Tyne, United Kingdom.
Graham R SmithInstitute of Cellular Medicine, Newcastle University, Newcastle upon Tyne, United Kingdom.
Daryl P ShanleyInstitute for Ageing and Health, Newcastle University, Newcastle upon Tyne, United Kingdom.
Ian M ClarkSchool of Biological Sciences, University of East Anglia, Norwich, United Kingdom.
David A YoungInstitute of Cellular Medicine, Newcastle University, Newcastle upon Tyne, United Kingdom.
Newcastle University · GBUniversity of East Anglia · GB

Funding

Arthritis Research UK 19424Medical Research Council MR/K006312/1Versus Arthritis 19424
6 · The paper itself

Abstract

microRNAs (miRNAs) are abundantly expressed in development where they are critical determinants of cell differentiation and phenotype. Accordingly miRNAs are essential for normal skeletal development and chondrogenesis in particular. However, the question of which miRNAs are specific to the chondrocyte phenotype has not been fully addressed. Using microarray analysis of miRNA expression during mesenchymal stem cell chondrogenic differentiation and detailed examination of the role of essential differentiation factors, such as SOX9, TGF-β, and the cell condensation phase, we characterize the repertoire of specific miRNAs involved in chondrocyte development, highlighting in particular miR-140 and miR-455. Further with the use of mRNA microarray data we integrate miRNA expression and mRNA expression during chondrogenesis to underline the particular importance of miR-140, especially the -5p strand. We provide a detailed identification and validation of direct targets of miR-140-5p in both chondrogenesis and adult chondrocytes with the use of microarray and 3'UTR analysis. This emphasizes the diverse array of targets and pathways regulated by miR-140-5p. We are also able to confirm previous experimentally identified targets but, additionally, identify a novel positive regulation of the Wnt signaling pathway by miR-140-5p. Wnt signaling has a complex role in chondrogenesis and skeletal development and these findings illustrate a previously unidentified role for miR-140-5p in regulation of Wnt signaling in these processes. Together these developments further highlight the role of miRNAs during chondrogenesis to improve our understanding of chondrocyte development and guide cartilage tissue engineering.

Indexed as

AdolescentAdultAgedAged, 80 and overCells, CulturedChondrogenesisGene Expression ProfilingGene TargetingGenome-Wide Association StudyHumansMesenchymal Stem CellsMicroRNAsMiddle AgedYoung AdultMicroRNAsMirn140 microRNA, humanChondrogenesisDifferentiationEpigeneticsGene expressionMesenchymal stem cellsmiRNA

Identifiers

PMID26175215
PMCPMC4737122
OpenAlexW1516322381

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.