Evidence map›Paper›PMID 26175037›Full record

ArticleBlood2015

Acylcarnitines are anticoagulants that inhibit factor Xa and are reduced in venous thrombosis, based on metabolomics data.

Hiroshi Deguchi, Yajnavalka Banerjee, Sunia Trauger, Gary Siuzdak, Ewa Kalisiak, José A Fernández, Linh Hoang, Minerva Tran, Subramanian Yegneswaran, Darlene J Elias and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 61 citations in OpenAlex.

  1. Trial
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  9. Lipid signatures of immunothrombosis: insights from VITT.Research and practice in thrombosis and haemostasis · 2025
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  11. Mapping Thrombosis Serum Markers byMolecules (Basel, Switzerland) · 2024
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  15. Observational
  16. Large-scale lipidomics profiling reveals characteristic lipid signatures associated with an increased cardiovascular risk.Clinical research in cardiology : official journal of the German Cardiac Society · 2023
    Article
  17. Review
  18. Review
  19. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Hiroshi DeguchiDepartment of Molecular and Experimental Medicine and.
Yajnavalka BanerjeeDepartment of Molecular and Experimental Medicine and.
Sunia TraugerCenter for Metabolomics and Mass Spectrometry, The Scripps Research Institute, La Jolla, CA; and.
Gary SiuzdakCenter for Metabolomics and Mass Spectrometry, The Scripps Research Institute, La Jolla, CA; and.
Ewa KalisiakCenter for Metabolomics and Mass Spectrometry, The Scripps Research Institute, La Jolla, CA; and.
José A FernándezDepartment of Molecular and Experimental Medicine and.
Linh HoangCenter for Metabolomics and Mass Spectrometry, The Scripps Research Institute, La Jolla, CA; and.
Minerva TranCenter for Metabolomics and Mass Spectrometry, The Scripps Research Institute, La Jolla, CA; and.
Subramanian YegneswaranDepartment of Molecular and Experimental Medicine and.
Darlene J EliasDepartment of Molecular and Experimental Medicine and The Scripps Clinic, La Jolla, CA.
John H GriffinDepartment of Molecular and Experimental Medicine and.
Scripps Research Institute · USScripps Clinic · US

Funding

THROMBUS FORMATION IN BABOONSP01HL031950 · NHLBI · SCRIPPS RESEARCH INSTITUTE, THE · PI GRIFFIN, JOHN H · 1985 to 2015
$29.4M
SCRIPPS TRANSLATIONAL SCIENCE INSTITUTE (UL1)UL1RR025774 · NCRR · SCRIPPS RESEARCH INSTITUTE, THE · PI TOPOL, ERIC JEFFREY · 2008 to 2011
$16.3M
Structure and Function of Protein CR01HL052246 · NHLBI · SCRIPPS RESEARCH INSTITUTE, THE · PI GRIFFIN, JOHN H · 2005 to 2017
$9.6M
PROTEINS OF COAGULATION PATHWAYSR01HL021544 · NHLBI · SCRIPPS RESEARCH INSTITUTE, THE · PI GRIFFIN, JOHN H · 1985 to 2014
$7.5M
REGULATION OF BRAIN THROMBOSIS IN STROKE MODELSR01HL063290 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ZLOKOVIC, BERISLAV V · 1999 to 2013
$7.5M
Structure-function of cytoprotective coagulation proteases and their receptorsR01HL104165 · NHLBI · SCRIPPS RESEARCH INSTITUTE, THE · PI MOSNIER, LAURENT OLIVIER · 2011 to 2024
$6.1M
Griffin: Venous Thromboembolism and mass spectrometry-based untargeted metabolomiRC1HL101034 · NHLBI · SCRIPPS RESEARCH INSTITUTE, THE · PI DEGUCHI, HIROSHI, GRIFFIN, JOHN H · 2009 to 2010
$952k
NCRR NIH HHS UL1 RR025774NHLBI NIH HHS P01 HL031950NHLBI NIH HHS R01 HL021544NHLBI NIH HHS R01 HL052246NHLBI NIH HHS R01 HL063290NHLBI NIH HHS R01 HL104165NHLBI NIH HHS RC1 HL101034
6 · The paper itself

Abstract

In many patients with deep vein thrombosis and pulmonary embolism (venous thromboembolism, VTE), biomarkers or genetic risk factors have not been identified. To discover novel plasma metabolites associated with VTE risk, we employed liquid chromatography-mass spectrometry-based untargeted metabolomics, which do not target any specific metabolites. Using the Scripps Venous Thrombosis Registry population for a case-control study, we discovered that 10:1 and 16:1 acylcarnitines were low in plasmas of the VTE patient group compared with matched controls, respectively. Data from targeted metabolomics studies showed that several long-chain acylcarnitines (10:1, 12:0, 12:2, 18:1, and 18:2) were lower in the VTE group. Clotting assays were used to evaluate a causal relationship for low acylcarnitines in patients with VTE. Various acylcarnitines inhibited factor Xa-initiated clotting. Inhibition of factor Xa by acylcarnitines was greater for longer acyl chains. Mechanistic studies showed that 16:0 acylcarnitine had anticoagulant activity in the absence of factor Va or phospholipids. Surface plasmon resonance investigations revealed that 16:0 acylcarnitine was bound to factor Xa and that binding did not require the γ-carboxy glutamic acid domain. In summary, our study identified low plasma levels of acylcarnitines in patients with VTE and showed that acylcarnitines have anticoagulant activity related to an ability to bind and inhibit factor Xa.

Indexed as

AdultAgedAged, 80 and overAnticoagulantsCarnitineCase-Control StudiesFactor XaFactor Xa InhibitorsFemaleHumansMaleMetabolomicsMiddle AgedProtein BindingProtein Structure, TertiaryRisk FactorsacylcarnitineAnticoagulantsCarnitineFactor XaFactor Xa InhibitorsWarfarin

Identifiers

PMID26175037
PMCPMC4582336
OpenAlexW973778043

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.