Evidence map›Paper›PMID 26173643›Full record

ArticleHuman mutation2015

Activating Mutations Affecting the Dbl Homology Domain of SOS2 Cause Noonan Syndrome.

Viviana Cordeddu, Jiani C Yin, Cecilia Gunnarsson, Carl Virtanen, Séverine Drunat, Francesca Lepri, Alessandro De Luca, Cesare Rossi, Andrea Ciolfi, Trevor J Pugh and 29 more

Open access · bronzeAbstract read
In one paragraph

Article in Human mutation, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it, 82 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. The molecular genetics of RASopathies: An update on novel disease genes and new disorders.American journal of medical genetics. Part C, Seminars in medical genetics · 2022
    Review
  11. Article
  12. Review
  13. Article
  14. The RASopathies: from pathogenetics to therapeutics.Disease models & mechanisms · 2022
    Review
  15. Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

39 authors at 20 institutions in 7 countries.

Viviana CordedduDipartimento di Ematologia, Oncologia e Medicina Molecolare, Istituto Superiore di Sanità, Rome, 00161, Italy.
Jiani C YinPrincess Margaret Cancer Centre, University Health Network and Department of Medical Biophysics, University of Toronto, Toronto, Ontario, ON, M5S, Canada.
Cecilia GunnarssonDepartment of Clinical and Experimental Medicine, Division of Clinical Genetics, Faculty of Health Sciences, Linköping University, Linköping, 581 83, Sweden.
Carl VirtanenPrincess Margaret Cancer Centre, University Health Network and Department of Medical Biophysics, University of Toronto, Toronto, Ontario, ON, M5S, Canada.
Séverine DrunatDépartement de Génétique, Hôpital Robert Debré, Paris, 75019, France.
Francesca LepriBambino Gesù Children's Hospital, Istituto di Ricovero e Cura a Carattere Scientifico, Rome, 00165, Italy.
Alessandro De LucaIRCCS-Casa Sollievo della Sofferenza Hospital, Mendel Institute, Rome, 00161, Italy.
Cesare RossiUO Genetica Medica, Policlinico S.Orsola-Malpighi, Bologna, 40138, Italy.
Andrea CiolfiDipartimento di Ematologia, Oncologia e Medicina Molecolare, Istituto Superiore di Sanità, Rome, 00161, Italy.
Trevor J PughPrincess Margaret Cancer Centre, University Health Network and Department of Medical Biophysics, University of Toronto, Toronto, Ontario, ON, M5S, Canada.
Alessandro BrusellesDipartimento di Ematologia, Oncologia e Medicina Molecolare, Istituto Superiore di Sanità, Rome, 00161, Italy.
James R PriestDivision of Pediatric Cardiology, Stanford University School of Medicine, Stanford University, Stanford, California, 94305.
Len A PennacchioGenomics Division, Lawrence Berkeley National Laboratory, Berkeley, California, 94720.
Zhibin LuPrincess Margaret Cancer Centre, University Health Network and Department of Medical Biophysics, University of Toronto, Toronto, Ontario, ON, M5S, Canada.
Arnavaz DaneshPrincess Margaret Cancer Centre, University Health Network and Department of Medical Biophysics, University of Toronto, Toronto, Ontario, ON, M5S, Canada.
Rene QuevedoPrincess Margaret Cancer Centre, University Health Network and Department of Medical Biophysics, University of Toronto, Toronto, Ontario, ON, M5S, Canada.
Alaa HamidPrincess Margaret Cancer Centre, University Health Network and Department of Medical Biophysics, University of Toronto, Toronto, Ontario, ON, M5S, Canada.
Simone MartinelliDipartimento di Ematologia, Oncologia e Medicina Molecolare, Istituto Superiore di Sanità, Rome, 00161, Italy.
Francesca PantaleoniDipartimento di Ematologia, Oncologia e Medicina Molecolare, Istituto Superiore di Sanità, Rome, 00161, Italy.
Maria GnazzoBambino Gesù Children's Hospital, Istituto di Ricovero e Cura a Carattere Scientifico, Rome, 00165, Italy.
Paola DanieleIRCCS-Casa Sollievo della Sofferenza Hospital, Mendel Institute, Rome, 00161, Italy.
Christina LissewskiInstitute of Human Genetics, University Hospital of Magdeburg, Otto-von-Guericke-University, Magdeburg, 39106, Germany.
Gianfranco BocchinfusoDipartimento di Scienze e Tecnologie Chimiche, Università di Roma 'Tor Vergata', Rome, 00133, Italy.
Lorenzo StellaDipartimento di Scienze e Tecnologie Chimiche, Università di Roma 'Tor Vergata', Rome, 00133, Italy.
Sylvie OdentService de Génétique Clinique, Hôpital SUD, Rennes, 35200, France.
Nicole PhilipDépartement de Génétique Médicale, Hôpital d'Enfants de la Timone, Marseille 13385, France.
Laurence FaivreCentre de Génétique, Hôpital d'Enfants, Dijon, 21000, France.
Marketa VlckovaDepartment of Biology and Medical Genetics, Charles University 2nd Faculty of Medicine and University Hospital Motol, Prague, 150 06, Czech Republic.
Eva SeemanovaDepartment of Biology and Medical Genetics, Charles University 2nd Faculty of Medicine and University Hospital Motol, Prague, 150 06, Czech Republic.
Cristina DigilioBambino Gesù Children's Hospital, Istituto di Ricovero e Cura a Carattere Scientifico, Rome, 00165, Italy.
Martin ZenkerInstitute of Human Genetics, University Hospital of Magdeburg, Otto-von-Guericke-University, Magdeburg, 39106, Germany.
Giuseppe ZampinoIstituto di Pediatria, Università Cattolica del Sacro Cuore, Rome, 00168, Italy.
Alain VerloesDépartement de Génétique, Hôpital Robert Debré, Paris, 75019, France.
Bruno DallapiccolaBambino Gesù Children's Hospital, Istituto di Ricovero e Cura a Carattere Scientifico, Rome, 00165, Italy.
Amy E RobertsDepartment of Cardiology and Division of Genetics, Boston Children's Hospital, Boston, Massachusetts, 02115.
Hélène CavéDépartement de Génétique, Hôpital Robert Debré, Paris, 75019, France.
Bruce D GelbThe Mindich Child Health and Development Institute, and the Departments of Pediatrics and Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York, 10029.
Benjamin G NeelPrincess Margaret Cancer Centre, University Health Network and Department of Medical Biophysics, University of Toronto, Toronto, Ontario, ON, M5S, Canada.
Marco TartagliaDipartimento di Ematologia, Oncologia e Medicina Molecolare, Istituto Superiore di Sanità, Rome, 00161, Italy.
Istituto Superiore di Sanità · ITBambino Gesù Children's Hospital · ITPrincess Margaret Cancer Centre · CAHôpital Robert-Debré · FRUniversity Health Network · CACasa Sollievo della Sofferenza · ITCharles University · CZHôpital d'Enfants · FRUniversity of Rome Tor Vergata · ITBoston Children's Hospital · USCardiovascular Institute of the South · USChild Health and Development Institute · USHôpital Nord · FRLawrence Berkeley National Laboratory · USLinköping University · SEMedica (Italy) · ITNew York University · USOtto-von-Guericke University Magdeburg · DEUniversità Cattolica del Sacro Cuore · ITUniversity Hospital Magdeburg · DE

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Drew R Jones · 1985 to 2026
$83.1M
Pediatric Scientist Development Program (PSDP) [K12]K12HD000850 · NICHD · YALE UNIVERSITY · PI Sallie R. Permar · 1987 to 2026
$44.1M
Generation of an In Vivo Human Genome Transcriptional Enhancer DatasetR01HG003988 · NHGRI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI Len Alexander Pennacchio · 2006 to 2026
$24.1M
Center for Mammalian Regulatory GenomicsU54HG006997 · NHGRI · LUDWIG INSTITUTE FOR CANCER RES LTD · PI REN, BING · 2012 to 2016
$14.3M
Yale Center for Mendelian DisordersU54HG006504 · NHGRI · YALE UNIVERSITY · PI GERSTEIN, MARK BENDER, GUNEL, MURAT · 2012 to 2015
$11.0M
Molecular studies of Noonan syndrome and related disordersR01HL071207 · NHLBI · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI GELB, BRUCE D · 2002 to 2016
$5.9M
The Ras/Mapk pathway in cardiovascular disease.R01HL083273 · NHLBI · UNIVERSITY HEALTH NETWORK · PI BACKX, PETER, NEEL, BENJAMIN G. · 2007 to 2014
$2.7M
Research Project: Genome-Wide Atlas of Craniofacial Transcriptional EnhancersU01DE020060 · NIDCR · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI VISEL, AXEL · 2009 to 2013
$2.1M
CIHRNCI NIH HHS P30 CA016087NHGRI NIH HHS R01 HG003988NHGRI NIH HHS U54 HG006504NHGRI NIH HHS U54 HG006997NHLBI NIH HHS R01 HL071207NHLBI NIH HHS R01 HL083273NHLBI NIH HHS R01 HL0832732NICHD NIH HHS K12 HD000850NIDCR NIH HHS U01 DE020060Telethon GGP13107
6 · The paper itself

Abstract

The RASopathies constitute a family of autosomal-dominant disorders whose major features include facial dysmorphism, cardiac defects, reduced postnatal growth, variable cognitive deficits, ectodermal and skeletal anomalies, and susceptibility to certain malignancies. Noonan syndrome (NS), the commonest RASopathy, is genetically heterogeneous and caused by functional dysregulation of signal transducers and regulatory proteins with roles in the RAS/extracellular signal-regulated kinase (ERK) signal transduction pathway. Mutations in known disease genes account for approximately 80% of affected individuals. Here, we report that missense mutations altering Son of Sevenless, Drosophila, homolog 2 (SOS2), which encodes a RAS guanine nucleotide exchange factor, occur in a small percentage of subjects with NS. Four missense mutations were identified in five unrelated sporadic cases and families transmitting NS. Disease-causing mutations affected three conserved residues located in the Dbl homology (DH) domain, of which two are directly involved in the intramolecular binding network maintaining SOS2 in its autoinhibited conformation. All mutations were found to promote enhanced signaling from RAS to ERK. Similar to NS-causing SOS1 mutations, the phenotype associated with SOS2 defects is characterized by normal development and growth, as well as marked ectodermal involvement. Unlike SOS1 mutations, however, those in SOS2 are restricted to the DH domain.

Indexed as

Genetic Association StudiesMutationAdolescentAdultAllelesAmino Acid SubstitutionChildDNA Mutational AnalysisExomeFaciesFemaleGenotypeHumansMaleModels, MolecularNoonan SyndromeSon of Sevenless ProteinsSOS2 protein, humangenotype-phenotype correlationsNoonan syndromeRAS signalingSOS2

Identifiers

PMID26173643
PMCPMC4604019
OpenAlexW1503778980

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.