Evidence map›Paper›PMID 26172289›Full record

ArticlePLoS computational biology2015

Modeling Inhibitory Interneurons in Efficient Sensory Coding Models.

Mengchen Zhu, Christopher J Rozell

Abstract read
In one paragraph

Article in PLoS computational biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Normative and mechanistic model of an adaptive circuit for efficient encoding and feature extraction.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  5. Neural Circuits for Fast Poisson Compressed Sensing in the Olfactory Bulb.Advances in neural information processing systems · 2023
    Article
  6. Article
  7. Natural gradient enables fast sampling in spiking neural networks.Advances in neural information processing systems · 2022
    Article
  8. Contextual Integration in Cortical and Convolutional Neural Networks.Frontiers in computational neuroscience · 2020
    Article
  9. Article
  10. Back-Propagation Learning in Deep Spike-By-Spike Networks.Frontiers in computational neuroscience · 2019
    Article
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Mengchen ZhuWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology, Atlanta, Georgia, United States of America.
Christopher J RozellSchool of Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, Georgia, United States of America.

Funding

CRCNS_:Neural Population Coding of Dynamic Natural ScenesR01EY019965 · NEI · UNIVERSITY OF CALIFORNIA BERKELEY · PI GRAY, CHARLES M, OLSHAUSEN, BRUNO A. · 2009 to 2013
$1.7M
NEI NIH HHS R01 EY019965NEI NIH HHS R01EY019965
6 · The paper itself

Abstract

There is still much unknown regarding the computational role of inhibitory cells in the sensory cortex. While modeling studies could potentially shed light on the critical role played by inhibition in cortical computation, there is a gap between the simplicity of many models of sensory coding and the biological complexity of the inhibitory subpopulation. In particular, many models do not respect that inhibition must be implemented in a separate subpopulation, with those inhibitory interneurons having a diversity of tuning properties and characteristic E/I cell ratios. In this study we demonstrate a computational framework for implementing inhibition in dynamical systems models that better respects these biophysical observations about inhibitory interneurons. The main approach leverages recent work related to decomposing matrices into low-rank and sparse components via convex optimization, and explicitly exploits the fact that models and input statistics often have low-dimensional structure that can be exploited for efficient implementations. While this approach is applicable to a wide range of sensory coding models (including a family of models based on Bayesian inference in a linear generative model), for concreteness we demonstrate the approach on a network implementing sparse coding. We show that the resulting implementation stays faithful to the original coding goals while using inhibitory interneurons that are much more biophysically plausible.

Indexed as

Models, NeurologicalAction PotentialsAnimalsComputer SimulationHumansInterneuronsNerve NetNeural InhibitionVisual CortexVisual Perception

Identifiers

PMID26172289
PMCPMC4501572

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.