Evidence map›Paper›PMID 26171931›Full record

ArticleMarine environmental research2015

Transcriptomes analysis of Aeromonas molluscorum Av27 cells exposed to tributyltin (TBT): Unravelling the effects from the molecular level to the organism.

Andreia Cruz, Raquel Rodrigues, Miguel Pinheiro, Sónia Mendo

Open access · hybridAbstract read
In one paragraph

Article in Marine environmental research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. Antibiotic resistance inFrontiers in microbiology · 2026
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Andreia CruzBiology Department & CESAM, University of Aveiro, Campus de Santiago, 3810-193, Aveiro, Portugal. Electronic address: andreia.cruz@ua.pt.
Raquel RodriguesBiology Department & CESAM, University of Aveiro, Campus de Santiago, 3810-193, Aveiro, Portugal.
Miguel PinheiroAdvanced Services Unit, Biocant - Biotechnology Innovation Center, 3060-325, Cantanhede, Portugal; School of Medicine, University of St. Andrews, North Haugh, KY16 9TF, St. Andrews, UK.
Sónia MendoBiology Department & CESAM, University of Aveiro, Campus de Santiago, 3810-193, Aveiro, Portugal.
University of Aveiro · PTBiocant · PT

Funding

Wellcome TrustWellcome Trust 097831/Z/11/Z
6 · The paper itself

Abstract

Aeromonas molluscorum Av27 cells were exposed to 0, 5 and 50 μM of TBT and the respective transcriptomes were obtained by pyrosequencing. Gene Ontology revealed that exposure to 5 μM TBT results in a higher number of repressed genes in contrast with 50 μM of TBT, where the number of over-expressed genes is greater. At both TBT concentrations, higher variations in gene expression were found in the functional categories associated with enzymatic activities, transport/binding and oxidation-reduction. A number of proteins are affected by TBT, such as the acriflavin resistance protein, several transcription-related proteins, several Hsps, ABC transporters, CorA and ZntB and other outer membrane efflux proteins, all of these involved in cellular metabolic processes, important to maintain overall cell viability. Using the STRING tool, several proteins with unknown function were related with others involved in degradation processes, such as the pyoverdine chromophore biosynthetic protein, that has been described as playing a role in the Sn-C cleavage of organotins. This approach has allowed a better understanding of the molecular effects of exposure of bacterial cells to TBT. Furthermore it contributes to the knowledge of the functional genomic aspects of bacteria exposed to this pollutant. Furthermore, the transcriptomic data gathered, and now publically available, constitute a valuable resource for comparative genome analysis.

Indexed as

TranscriptomeAeromonasGenes, BacterialSequence Analysis, RNATrialkyltin CompoundsWater Pollutants, ChemicalTrialkyltin CompoundstributyltinWater Pollutants, ChemicalAcriflavineDioxygenasePyoverdineQuantitative real-time PCRTributyltin

Identifiers

PMID26171931
PMCPMC4541717
OpenAlexW776884061

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.