Evidence map›Paper›PMID 26171358›Full record

ArticleIranian journal of public health2014

Development of Multiplex PCR for Simultaneous Detection of Three Pathogenic Shigella Species.

Reza Ranjbar, Davoud Afshar, Ali Mehrabi Tavana, Ali Najafi, Fatemeh Pourali, Zahra Safiri, Rahim Sorouri Zanjani, Nematollah Jonaidi Jafari

Open access · greenAbstract read
In one paragraph

Article in Iranian journal of public health, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
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  3. Rapid Molecular Approach for Simultaneous Detection ofOsong public health and research perspectives · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Reza RanjbarMolecular Biology Research Center, Baqiyatallah University of Medical Sciences, Tehran, Iran.
Davoud AfsharDept. of Pathobiology, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran.
Ali Mehrabi TavanaHealth Management Research Center, Baqiyatallah University of Medical Sciences, Tehran, Iran.
Ali NajafiMolecular Biology Research Center, Baqiyatallah University of Medical Sciences, Tehran, Iran.
Fatemeh PouraliMolecular Biology Research Center, Baqiyatallah University of Medical Sciences, Tehran, Iran.
Zahra SafiriMolecular Biology Research Center, Baqiyatallah University of Medical Sciences, Tehran, Iran.
Rahim Sorouri ZanjaniMolecular Biology Research Center, Baqiyatallah University of Medical Sciences, Tehran, Iran.
Nematollah Jonaidi JafariHealth Research Center, Baqiyatallah University of Medical Sciences, Tehran, Iran.
Baqiyatallah University of Medical Sciences · IRTehran University of Medical Sciences · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundShigella species are among the common causes of bacterial diarrhoeal diseases. Traditional detection methods are time-consuming resulting in delay in treatment and control of Shigella infections thus there is a need to develop molecular methods for rapid and simultaneous detection of Shigella spp. In this study a rapid multiplex PCR were developed for simultaneous detection of three pathogenic Shigella species.

methodsFor detection of Shigella spp., a pair of primers was used to replicate a chromosomal sequence. Three other sets of primers were also designed to amplify the target genes of three most common species of Shigella in Iran including S. sonnei, S. flexneri and S. boydii. The multiplex PCR assay was optimized for simultaneous detection and differentiation of three pathogenic Shigella species. The assay specificity was investigated by testing different strains of Shigella and other additional strains belonging to non Shigella species, but responsible for foodborne diseases.

resultsThe Shigella genus specific PCR yielded the expected DNA band of 159 bp in all tested strains belonging to four Shigella species. The standard and multiplex PCR assays also produced the expected fragments of 248 bp, 503 bp, and 314 bp, for S. boydii, S. sonnei and S. flexneri, respectively. Each species-specific primer pair did not show any cross-reactivity.

conclusionBoth standard and multiplex PCR protocols had a good specificity. They can provide a valuable tool for the rapid and simultaneous detection and differentiation of three most prevalent Shigella species in Iran.

Indexed as

Multiplex-PCRShigella spp.Shigellosis

Identifiers

PMID26171358
PMCPMC4499087
OpenAlexW2117634096

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.