Evidence map›Paper›PMID 26171250›Full record

ArticleInternational journal of breast cancer2015

Expression of Tropomyosin 1 Gene Isoforms in Human Breast Cancer Cell Lines.

Syamalima Dube, Santhi Yalamanchili, Joseph Lachant, Lynn Abbott, Patricia Benz, Charles Mitschow, Dipak K Dube, Bernard J Poiesz

Open access · goldAbstract read
In one paragraph

Article in International journal of breast cancer, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Tropomyosins: Potential Biomarkers for Urothelial Bladder Cancer.International journal of molecular sciences · 2019
    Review
  7. Article
  8. Article
  9. Sarcomeric TPM3α in developing chicken.Cytoskeleton (Hoboken, N.J.) · 2018
    Article
  10. Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Syamalima DubeDivision of Hematology/Oncology, Department of Medicine, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Santhi YalamanchiliDivision of Hematology/Oncology, Department of Medicine, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Joseph LachantDivision of Hematology/Oncology, Department of Medicine, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Lynn AbbottDivision of Hematology/Oncology, Department of Medicine, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Patricia BenzDivision of Hematology/Oncology, Department of Medicine, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Charles MitschowDivision of Hematology/Oncology, Department of Medicine, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Dipak K DubeDivision of Hematology/Oncology, Department of Medicine, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Bernard J PoieszDivision of Hematology/Oncology, Department of Medicine, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
SUNY Upstate Medical University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nine malignant breast epithelial cell lines and 3 normal breast cell lines were examined for stress fiber formation and expression of TPM1 isoform-specific RNAs and proteins. Stress fiber formation was strong (++++) in the normal cell lines and varied among the malignant cell lines (negative to +++). Although TPM1γ and TPM1δ were the dominant transcripts of TPM1, there was no clear evidence for TPM1δ protein expression. Four novel human TPM1 gene RNA isoforms were discovered (λ, μ, ν, and ξ), which were not identified in adult and fetal human cardiac tissues. TPM1λ was the most frequent isoform expressed in the malignant breast cell lines, and it was absent in normal breast epithelial cell lines. By western blotting, we were unable to distinguish between TPM1γ, λ, and ν protein expression, which were the only TPM1 gene protein isoforms potentially expressed. Some malignant cell lines demonstrated increased or decreased expression of these isoforms relative to the normal breast cell lines. Stress fiber formation did not correlate with TPM1γ RNA expression but significantly and inversely correlated with TPM1δ and TPM1λ expression, respectively. The exact differences in expression of these novel isoforms and their functional properties in breast epithelial cells will require further study.

Identifiers

PMID26171250
PMCPMC4480939
OpenAlexW1586800489

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.