Evidence map›Paper›PMID 26171079›Full record

ArticleApplied clinical informatics2015

Validation of a Crowdsourcing Methodology for Developing a Knowledge Base of Related Problem-Medication Pairs.

A B McCoy, A Wright, M Krousel-Wood, E J Thomas, J A McCoy, D F Sittig

Abstract readValidation Study
In one paragraph

Article in Applied clinical informatics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

A B McCoyCenter for Applied Health Services Research, Ochsner Health System , New Orleans, LA ; Department of Biostatistics and Bioinformatics, Tulane University School of Public Health and Tropical Medicine , New Orleans, LA.
A WrightDepartment of Medicine, Brigham and Women's Hospital , Boston, MA ; Department of Clinical Informatics Research and Development, Partners HealthCare , Boston, MA ; Harvard Medical School , Boston, MA.
M Krousel-WoodCenter for Applied Health Services Research, Ochsner Health System , New Orleans, LA ; Department of Medicine, Tulane University School of Medicine , New Orleans, LA ; Department of Epidemiology, Tulane University School of Public Health and Tropical Medicine , New Orleans, LA.
E J ThomasDepartment of Internal Medicine, The University of Texas Medical School at Houston , Houston, TX ; The University of Texas at Houston-Memorial Hermann Center for Healthcare Quality and Safety , Houston, TX.
J A McCoyDepartment of Urology, Ochsner Health System , New Orleans, LA.
D F SittigThe University of Texas at Houston-Memorial Hermann Center for Healthcare Quality and Safety , Houston, TX ; The University of Texas School of Biomedical Informatics at Houston , Houston, TX.

Funding

Tracking & Evaluation CoreU54GM104940 · NIGMS · LSU PENNINGTON BIOMEDICAL RESEARCH CTR · PI JUDD E SHELLITO · 2012 to 2026
$69.1M
InSPECt: Interactive Surveillance Portal for Evaluating Clinical supportK22LM011430 · NLM · TULANE UNIVERSITY OF LOUISIANA · PI MCCOY, ALLISON B · 2013 to 2015
$372k
NIGMS NIH HHS U54 GM104940NLM NIH HHS 1 K22 LM011430-01A1NLM NIH HHS K22 LM011430
6 · The paper itself

Abstract

backgroundClinical knowledge bases of problem-medication pairs are necessary for many informatics solutions that improve patient safety, such as clinical summarization. However, developing these knowledge bases can be challenging.

objectiveWe sought to validate a previously developed crowdsourcing approach for generating a knowledge base of problem-medication pairs in a large, non-university health care system with a widely used, commercially available electronic health record.

methodsWe first retrieved medications and problems entered in the electronic health record by clinicians during routine care during a six month study period. Following the previously published approach, we calculated the link frequency and link ratio for each pair then identified a threshold cutoff for estimated problem-medication pair appropriateness through clinician review; problem-medication pairs meeting the threshold were included in the resulting knowledge base. We selected 50 medications and their gold standard indications to compare the resulting knowledge base to the pilot knowledge base developed previously and determine its recall and precision.

resultsThe resulting knowledge base contained 26,912 pairs, had a recall of 62.3% and a precision of 87.5%, and outperformed the pilot knowledge base containing 11,167 pairs from the previous study, which had a recall of 46.9% and a precision of 83.3%.

conclusionsWe validated the crowdsourcing approach for generating a knowledge base of problem-medication pairs in a large non-university health care system with a widely used, commercially available electronic health record, indicating that the approach may be generalizable across healthcare settings and clinical systems. Further research is necessary to better evaluate the knowledge, to compare crowdsourcing with other approaches, and to evaluate if incorporating the knowledge into electronic health records improves patient outcomes.

Indexed as

Drug Therapy, Computer-AssistedElectronic Health RecordsKnowledge BasesAcademic Medical CentersCrowdsourcingHumanscomputer-assisted drug therapyCrowdsourcingelectronic health recordsknowledge basesproblem-oriented medical recordsvalidation studies

Identifiers

PMID26171079
PMCPMC4493334

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.