Evidence map›Paper›PMID 26171078›Full record

ArticleApplied clinical informatics2015

The Accuracy of an Electronic Pulmonary Embolism Severity Index Auto-Populated from the Electronic Health Record: Setting the stage for computerized clinical decision support.

D R Vinson, J E Morley, J Huang, V Liu, M L Anderson, C E Drenten, R P Radecki, D K Nishijima, M E Reed, Kaisers Permanente CREST Network

Open access · bronzeAbstract read
In one paragraph

Article in Applied clinical informatics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

  1. Pooled it
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  10. Automated Pulmonary Embolism Risk Classification and Guideline Adherence for Computed Tomography Pulmonary Angiography Ordering.Academic emergency medicine : official journal of the Society for Academic Emergency Medicine · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

D R VinsonThe Permanente Medical Group , Oakland, California ; Department of Emergency Medicine, Kaiser Permanente Roseville Medical Center , Roseville, California ; Kaiser Permanente Division of Research , Oakland, California.
J E MorleyDepartment of Emergency Medicine, University of California Davis School of Medicine , Sacramento, California.
J HuangKaiser Permanente Division of Research , Oakland, California.
V LiuThe Permanente Medical Group , Oakland, California ; Kaiser Permanente Division of Research , Oakland, California ; Department of Pulmonary and Critical Care Medicine, Kaiser Permanente Santa Clara Medical Center , Santa Clara, California.
M L AndersonThe Permanente Medical Group , Oakland, California ; Department of Emergency Medicine, Kaiser Permanente Roseville Medical Center , Roseville, California.
C E DrentenDepartment of Emergency Medicine, Sutter General Medical Center , Sacramento, California.
R P RadeckiDepartment of Emergency Medicine, The University of Texas Medical School , Houston, Texas.
D K NishijimaDepartment of Emergency Medicine, University of California Davis School of Medicine , Sacramento, California.
M E ReedKaiser Permanente Division of Research , Oakland, California.
Kaisers Permanente CREST Network
Kaiser Permanente · USUniversity of California, Davis · US

Funding

Data-driven Precision medicine in sepsisK23GM112018 · NIGMS · KAISER FOUNDATION RESEARCH INSTITUTE · PI LIU, VINCENT · 2014 to 2017
$768k
DNA SEQUENCE RECOGNITION BY THE YEAST GCN4 ACTIVATORF32GM011201 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI SELLERS, JOAN W · 1987 to 1988
–
NIGMS NIH HHS K23GM11201NIGMS NIH HHS K23 GM112018
6 · The paper itself

Abstract

backgroundThe Pulmonary Embolism (PE) Severity Index identifies emergency department (ED) patients with acute PE that can be safely managed without hospitalization. However, the Index comprises 11 weighted variables, complexity that can impede its integration into contextual workflow.

objectiveWe designed a computerized version of the PE Severity Index (e-Index) to automatically extract the required variables from discrete fields in the electronic health record (EHR). We tested the e-Index on the study population to determine its accuracy compared with a gold standard generated by physician abstraction of the EHR on manual chart review.

methodsThis retrospective cohort study included adults with objectively-confirmed acute PE in four community EDs from 2010-2012. Outcomes included performance characteristics of the e-Index for individual values, the number of cases requiring physician editing, and the accuracy of the e-Index risk category (low vs. higher).

resultsFor the 593 eligible patients, there were 6,523 values automatically extracted. Fifty one of these needed physician editing, yielding an accuracy at the value-level of 99.2% (95% confidence interval [CI], 99.0%-99.4%). Sensitivity was 96.9% (95% CI, 96.0%-97.9%) and specificity was 99.8% (95% CI, 99.7%-99.9%). The 51 corrected values were distributed among 47 cases: 43 cases required the correction of one variable and four cases required the correction of two. At the risk-category level, the e-Index had an accuracy of 96.8% (95% CI, 95.0%-98.0%), under-classifying 16 higher-risk cases (2.7%) and over-classifying 3 low-risk cases (0.5%).

conclusionOur automated extraction of variables from the EHR for the e-Index demonstrates substantial accuracy, requiring a minimum of physician editing. This should increase user acceptability and implementation success of a computerized clinical decision support system built around the e-Index, and may serve as a model to automate other complex risk stratification instruments.

Indexed as

Decision Support Systems, ClinicalElectronic Health RecordsSeverity of Illness IndexAdultAgedAutomationCohort StudiesDocumentationEmergency Service, HospitalFemaleHumansMalePulmonary EmbolismRetrospective StudiesClinical decision support systemsdata completenesselectronic health recordemergency medicinepulmonary embolismrisk assessment

Identifiers

PMID26171078
PMCPMC4493333
OpenAlexW2140457310

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.