Evidence map›Paper›PMID 26169409›Full record

ArticleAntimicrobial agents and chemotherapy2015

Residues Distal to the Active Site Contribute to Enhanced Catalytic Activity of Variant and Hybrid β-Lactamases Derived from CTX-M-14 and CTX-M-15.

Dandan He, Jiachi Chiou, Zhenling Zeng, Lanping Liu, Xiaojie Chen, Li Zeng, Edward Wai Chi Chan, Jian-Hua Liu, Sheng Chen

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
1.2field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 42 citations in OpenAlex.

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  19. First Report of a FoodborneFrontiers in microbiology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Dandan HeCollege of Veterinary Medicine, Guangdong Provincial Key Laboratory of Veterinary Pharmaceutics Development and Safety Evaluation, National Reference Laboratory of Veterinary Drug Residues (SCAU), South China Agricultural University, Guangzhou, People's Republic of China Shenzhen Key Laboratory for Food Biological Safety Control, Food Safety and Technology Research Center, Hong Kong Polytechnic University, Shen Zhen Research Institute, Shenzhen, People's Republic of China State Key Laboratory of Chiroscience, Department of Applied Biology and Chemical Technology, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong SAR.
Jiachi ChiouShenzhen Key Laboratory for Food Biological Safety Control, Food Safety and Technology Research Center, Hong Kong Polytechnic University, Shen Zhen Research Institute, Shenzhen, People's Republic of China State Key Laboratory of Chiroscience, Department of Applied Biology and Chemical Technology, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong SAR.
Zhenling ZengCollege of Veterinary Medicine, Guangdong Provincial Key Laboratory of Veterinary Pharmaceutics Development and Safety Evaluation, National Reference Laboratory of Veterinary Drug Residues (SCAU), South China Agricultural University, Guangzhou, People's Republic of China.
Lanping LiuCollege of Veterinary Medicine, Guangdong Provincial Key Laboratory of Veterinary Pharmaceutics Development and Safety Evaluation, National Reference Laboratory of Veterinary Drug Residues (SCAU), South China Agricultural University, Guangzhou, People's Republic of China.
Xiaojie ChenCollege of Veterinary Medicine, Guangdong Provincial Key Laboratory of Veterinary Pharmaceutics Development and Safety Evaluation, National Reference Laboratory of Veterinary Drug Residues (SCAU), South China Agricultural University, Guangzhou, People's Republic of China.
Li ZengCollege of Veterinary Medicine, Guangdong Provincial Key Laboratory of Veterinary Pharmaceutics Development and Safety Evaluation, National Reference Laboratory of Veterinary Drug Residues (SCAU), South China Agricultural University, Guangzhou, People's Republic of China.
Edward Wai Chi ChanShenzhen Key Laboratory for Food Biological Safety Control, Food Safety and Technology Research Center, Hong Kong Polytechnic University, Shen Zhen Research Institute, Shenzhen, People's Republic of China State Key Laboratory of Chiroscience, Department of Applied Biology and Chemical Technology, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong SAR.
Jian-Hua LiuCollege of Veterinary Medicine, Guangdong Provincial Key Laboratory of Veterinary Pharmaceutics Development and Safety Evaluation, National Reference Laboratory of Veterinary Drug Residues (SCAU), South China Agricultural University, Guangzhou, People's Republic of China jhliu@scau.edu.cn sheng.chen@inet.polyu.edu.hk.
Sheng ChenShenzhen Key Laboratory for Food Biological Safety Control, Food Safety and Technology Research Center, Hong Kong Polytechnic University, Shen Zhen Research Institute, Shenzhen, People's Republic of China State Key Laboratory of Chiroscience, Department of Applied Biology and Chemical Technology, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong SAR jhliu@scau.edu.cn sheng.chen@inet.polyu.edu.hk.
South China Agricultural University · CNHong Kong Polytechnic University · HK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A variety of CTX-M-type extended-spectrum β-lactamases (ESBLs), including hybrid ones, have been reported in China that are uncommon elsewhere. To better characterize the substrate profiles and enzymatic mechanisms of these enzymes, we performed comparative kinetic analyses of both parental and hybrid CTX-M enzymes, including CTX-M-15, -132, -123, -64, -14 and -55, that are known to confer variable levels of β-lactam resistance in the host strains. All tested enzymes were susceptible to serine β-lactamase inhibitors, with sulbactam exhibiting the weakest inhibitory effects. CTX-M-55, which differs from CTX-M-15 by one substitution, A(77)V, displayed enhanced catalytic activity (kcat/Km) against expanded-spectrum cephalosporins (ESCs). CTX-M-55 exhibits higher structure stability, most likely by forming hydrophobic interactions between A(77)V and various key residues in different helices, thereby stabilizing the core architecture of the helix cluster, and indirectly contributes to a more stable active site conformation, which in turn shows higher catalytic efficiency and is more tolerant to temperature change. Analyses of the hybrids and their parental prototypes showed that evolution from CTX-M-15 to CTX-M-132, CTX-M-123, and CTX-M-64, characterized by gradual enhancement of catalytic activity to ESCs, was attributed to introduction of different substitutions to amino acids distal to the active site of CTX-M-15. Similarly, the increased hydrolytic activities against cephalosporins and sensitivity to β-lactamase inhibitors, clavulanic acid and sulbactam, of CTX-M-64 were partly due to the amino acids that were different from CTX-M-14 and located at both the C and N termini of CTX-M-64. These data indicate that residues distal to the active site of CTX-Ms contributed to their enhanced catalytic activities to ESCs.

Indexed as

PhylogenyAmino Acid SequenceAnimalsAnti-Bacterial Agentsbeta-Lactamasesbeta-LactamsCatalytic DomainChickensEnzyme AssaysEscherichia coliGene ExpressionHumansHydrophobic and Hydrophilic InteractionsKineticsModels, MolecularMolecular Sequence DataAnti-Bacterial Agentsbeta-lactamase CTX-M-14beta-lactamase CTX-M-15beta-Lactamasesbeta-LactamsRecombinant Proteins

Identifiers

PMID26169409
PMCPMC4576060
OpenAlexW1924302788

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.