Evidence map›Paper›PMID 26168860›Full record

ArticleInfection2016

A novel duplex real-time PCR permits simultaneous detection and differentiation of Borrelia miyamotoi and Borrelia burgdorferi sensu lato.

R Venczel, L Knoke, M Pavlovic, E Dzaferovic, T Vaculova, C Silaghi, E Overzier, R Konrad, S Kolenčík, M Derdakova and 4 more

Abstract readEvaluation Study
PubMed Publisher
In one paragraph

Article in Infection, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Zoonotic Pathogens inPathogens (Basel, Switzerland) · 2026
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  8. Two decades of research onFrontiers in cellular and infection microbiology · 2024
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  9. Article
  10. Review
  11. Life (Basel, Switzerland) · 2021
    Article
  12. Article
  13. Microorganisms · 2021
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. A newEuro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2019
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

R VenczelGerman National Reference Centre for Borrelia, Veterinärstr. 2, 85764, Oberschleissheim, Germany. rita.venczel92@gmail.com.
L KnokeZoology/Parasitology, Ruhr University Bochum, Universitätsstr. 150, 44780, Bochum, Germany. Lisa.Knoke@ruhr-uni-bochum.de.
M PavlovicBavarian Health and Food Safety Authority, Veterinärstr. 2, 85764, Oberschleissheim, Germany. Melanie.Pavlovic@lgl.bayern.de.
E DzaferovicGerman National Reference Centre for Borrelia, Veterinärstr. 2, 85764, Oberschleissheim, Germany. eldina.dzaferovic@student.hswt.de.
T VaculovaInstitute of Zoology, Slovak Academy of Sciences, Dúbravská cesta 9, 84506, Bratislava, Slovakia. tana.vaculova@gmail.com.
C SilaghiComparative Tropical Medicine and Parasitology, Ludwig-Maximilians-Universität München, Munich, Leopoldstr. 5, 80802, Munich, Germany. cornelia.silaghi@uzh.ch.
E OverzierComparative Tropical Medicine and Parasitology, Ludwig-Maximilians-Universität München, Munich, Leopoldstr. 5, 80802, Munich, Germany. Evelyn.Overzier@micro.vetmed.uni-muenchen.de.
R KonradBavarian Health and Food Safety Authority, Veterinärstr. 2, 85764, Oberschleissheim, Germany. regina.konrad@lgl.bayern.de.
S KolenčíkUniversity of Veterinary and Pharmaceutical Sciences, Palackého 1/3, 612 42, Brno, Czech Republic. stanislav.kolencik@gmail.com.
M DerdakovaInstitute of Zoology, Slovak Academy of Sciences, Dúbravská cesta 9, 84506, Bratislava, Slovakia. marketa.derdakova@gmail.com.
A SingBavarian Health and Food Safety Authority, Veterinärstr. 2, 85764, Oberschleissheim, Germany. andreas.sing@lgl.bayern.de.
G A SchaubZoology/Parasitology, Ruhr University Bochum, Universitätsstr. 150, 44780, Bochum, Germany. Guenter.schaub@rub.de.
G MargosGerman National Reference Centre for Borrelia, Veterinärstr. 2, 85764, Oberschleissheim, Germany. gabriele.margos@lgl.bayern.de.
V FingerleGerman National Reference Centre for Borrelia, Veterinärstr. 2, 85764, Oberschleissheim, Germany. volker.fingerle@lgl.bayern.de.
Institute of Bioinformatics and Systems Biology · DELudwig-Maximilians-Universität München · DERuhr University Bochum · DEInstitute of Zoology of the Slovak Academy of Sciences · SKSlovak Academy of Sciences · SKUniversity of Veterinary Sciences Brno · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeFor simultaneous detection of Borrelia miyamotoi (relapsing fever spirochete) and Borrelia burgdorferi sensu lato, we have developed a duplex real-time PCR targeting the flagellin gene (flaB; p41), a locus frequently used in routine diagnostic PCR for B. burgdorferi s.l. detection.

methodsPrimers and probes were designed using multiple alignments of flaB sequences of B. miyamotoi and B. burgdorferi s.l. species. The sensitivity and specificity of primers and probes were determined using serial dilutions (ranging from 10(4) to 10(-1)) of B. miyamotoi and B. burgdorferi s.l. DNA and of several species of relapsing fever spirochetes. Conventional PCR on recG and glpQ and sequencing of p41 PCR products were used to confirm the species assignment.

resultsThe detection limit of both singleplex and duplex PCR was 10 genome equivalents except for B. spielmanii and two B. garinii genotypes which showed a detection limit of 10(2) genome equivalents. There was no cross reactivity of the B. miyamotoi primers/probes with B. burgdorferi s.l. DNA, while the B. burgdorferi s.l. primer/probe generated a signal with B. hermsii DNA. Out of 2341 Ixodes ricinus ticks from Germany and Slovakia that were screened simultaneously for the presence of B. miyamotoi and B. burgdorferi s.l., 52 were positive for B. miyamotoi and 276 for B. burgdorferi s.l., denoting an average prevalence of 2.2% for B. miyamotoi and 11.8% for B. burgdorferi s.l., and B. miyamotoi DNA was also detectable by PCR using artificial clinical samples.

conclusionThe duplex real-time PCR developed here represents a method that permits simultaneous detection and differentiation of B. burgdorferi s.l. and B. miyamotoi in environmental and potentially clinical samples.

Indexed as

AnimalsBorreliaDNA PrimersFlagellinGermanyHumansIxodesMultiplex Polymerase Chain ReactionOligonucleotide ProbesReal-Time Polymerase Chain ReactionSensitivity and SpecificitySlovakiaDNA PrimersFlagellinOligonucleotide ProbesBorrelia burgdorferi sensu latoBorrelia miyamotoiReal-time PCR

Identifiers

PMID26168860
OpenAlexW2208211178

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.