Evidence map›Paper›PMID 26168433›Full record

ArticleIEEE transactions on medical imaging2016

Automatic Segmentation of Mechanically Inhomogeneous Tissues Based on Deformation Gradient Jump.

Colleen M Witzenburg, Rohit Y Dhume, Spencer P Lake, Victor H Barocas

Abstract read
In one paragraph

Article in IEEE transactions on medical imaging, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Segmenting mechanically heterogeneous domains via unsupervised learning.Biomechanics and modeling in mechanobiology · 2024
    Article
  3. Article
  4. Article
  5. A nonlinear anisotropic inverse method for computational dissection of inhomogeneous planar tissues.Computer methods in biomechanics and biomedical engineering · 2016
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Colleen M Witzenburg
Rohit Y Dhume
Spencer P Lake
Victor H Barocas

Funding

Multiscale Mechanics of Bioengineered TissueR01EB005813 · NIBIB · UNIVERSITY OF MINNESOTA TWIN CITIES · PI BAROCAS, VICTOR H · 2005 to 2017
$4.6M
NIBIB NIH HHS R01 EB005813NIBIB NIH HHS R01-EB005813
6 · The paper itself

Abstract

Variations in properties, active behavior, injury, scarring, and/or disease can all cause a tissue's mechanical behavior to be heterogeneous. Advances in imaging technology allow for accurate full-field displacement tracking of both in vitro and in vivo deformation from an applied load. While detailed strain fields provide some insight into tissue behavior, material properties are usually determined by fitting stress-strain behavior with a constitutive equation. However, the determination of the mechanical behavior of heterogeneous soft tissue requires a spatially varying constitutive equation (i.e., one in which the material parameters vary with position). We present an approach that computationally dissects the sample domain into many homogeneous subdomains, wherein subdomain boundaries are formed by applying a betweenness based graphical analysis to the deformation gradient field to identify locations with large discontinuities. This novel partitioning technique successfully determined the shape, size and location of regions with locally similar material properties for: (1) a series of simulated soft tissue samples prescribed with both abrupt and gradual changes in anisotropy strength, prescribed fiber alignment, stiffness, and nonlinearity, (2) tissue analogs (PDMS and collagen gels) which were tested biaxially and speckle tracked (3) and soft tissues which exhibited a natural variation in properties (cadaveric supraspinatus tendon), a pathologic variation in properties (thoracic aorta containing transmural plaque), and active behavior (contracting cardiac sheet). The routine enables the dissection of samples computationally rather than physically, allowing for the study of small tissues specimens with unknown and irregular inhomogeneity.

Indexed as

AnimalsBiomechanical PhenomenaElasticity Imaging TechniquesHumansImage Processing, Computer-AssistedModels, BiologicalPattern Recognition, AutomatedRats

Identifiers

PMID26168433
PMCPMC4739827

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.