Evidence map›Paper›PMID 26165925›Full record

ArticleCell stem cell2015

Runx1 Deficiency Decreases Ribosome Biogenesis and Confers Stress Resistance to Hematopoietic Stem and Progenitor Cells.

Xiongwei Cai, Long Gao, Li Teng, Jingping Ge, Zaw Min Oo, Ashish R Kumar, D Gary Gilliland, Philip J Mason, Kai Tan, Nancy A Speck

Open access · bronzeAbstract read
In one paragraph

Article in Cell stem cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 138 papers.

0numbers the graph read from it
0cells of the map it votes in
138citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

138 citing papers in PubMed, 235 citations in OpenAlex.

  1. Article
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  6. Science advances · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Targeting RUNX1 Germline Variants: Agents Under Investigation.Current hematologic malignancy reports · 2025
    Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
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  18. Article
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78 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Xiongwei CaiAbramson Family Cancer Research Institute, Institute for Regenerative Medicine and Department of Cell and Developmental Biology, University of Pennsylvania, Philadelphia, PA 19104, USA.
Long GaoDepartment of Biomedical Engineering, University of Iowa, Iowa City, IA 52242, USA.
Li TengDepartment of Internal Medicine, University of Iowa, Iowa City, IA 52242, USA.
Jingping GeDepartment of Pediatrics, The Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Zaw Min OoAbramson Family Cancer Research Institute, Institute for Regenerative Medicine and Department of Cell and Developmental Biology, University of Pennsylvania, Philadelphia, PA 19104, USA.
Ashish R KumarDivision of Bone Marrow Transplantation and Immune Deficiency, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229, USA.
D Gary GillilandAbramson Family Cancer Research Institute, Institute for Regenerative Medicine and Department of Cell and Developmental Biology, University of Pennsylvania, Philadelphia, PA 19104, USA; Abramson Family Cancer Research Institute and Department of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Philip J MasonDepartment of Pediatrics, The Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Kai TanDepartment of Internal Medicine, University of Iowa, Iowa City, IA 52242, USA.
Nancy A SpeckAbramson Family Cancer Research Institute, Institute for Regenerative Medicine and Department of Cell and Developmental Biology, University of Pennsylvania, Philadelphia, PA 19104, USA. Electronic address: nancyas@exchange.upenn.edu.
Cancer Research Institute · USUniversity of Iowa · USChildren's Hospital of Philadelphia · USCincinnati Children's Hospital Medical Center · US

Funding

UNIVERSITY OF PENNSYLVANIA CAN CTR SUPPORT GRANTP30CA016520 · NCI · UNIVERSITY OF PENNSYLVANIA · PI SHELLEY L BERGER · 1985 to 2026
$222.3M
THE PATHOGENESIS OF DYSKERATOSIS CONGENITAR01CA106995 · NCI · WASHINGTON UNIVERSITY · PI MASON, PHILIP J · 2005 to 2014
$3.0M
The Role of MEIS1 in Hematopoiesis and Hematopoietic TransformationR01HL111192 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI KUMAR, ASHISH · 2012 to 2016
$2.0M
EPIGENETIC REGULATION OF STEM CELL FATE CHOICER01HG006130 · NHGRI · UNIVERSITY OF IOWA · PI TAN, KAI · 2012 to 2016
$1.7M
Regulation of hematopoietic stem cell and progenitor cell proliferation by Runx1R01CA149976 · NCI · UNIVERSITY OF PENNSYLVANIA · PI SPECK, NANCY · 2011 to 2015
$1.6M
Computational Methods for Unraveling Combinatorial Gene RegulationR01GM108716 · NIGMS · UNIVERSITY OF IOWA · PI TAN, KAI · 2014 to 2017
$1.2M
Epigenetic landscapes of embryonic lymphoid progenitors and HSCsR21HD081054 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI SPECK, NANCY, TAN, KAI · 2015 to 2016
$441k
NCI NIH HHS NIH R01 CA106995NCI NIH HHS NIH R01 CA149976NCI NIH HHS P30 CA016520NCI NIH HHS R01 CA106995NCI NIH HHS R01 CA149976NHGRI NIH HHS NIH R01 HG006130NHGRI NIH HHS R01 HG006130NHLBI NIH HHS NIH R01 HL111192NHLBI NIH HHS R01 HL111192NICHD NIH HHS R21 HD081054NIGMS NIH HHS R01 GM108716
6 · The paper itself

Abstract

The transcription factor RUNX1 is frequently mutated in myelodysplastic syndrome and leukemia. RUNX1 mutations can be early events, creating preleukemic stem cells that expand in the bone marrow. Here we show, counterintuitively, that Runx1-deficient hematopoietic stem and progenitor cells (HSPCs) have a slow growth, low biosynthetic, small cell phenotype and markedly reduced ribosome biogenesis (Ribi). The reduced Ribi involved decreased levels of rRNA and many mRNAs encoding ribosome proteins. Runx1 appears to directly regulate Ribi; Runx1 is enriched on the promoters of genes encoding ribosome proteins and binds the rDNA repeats. Runx1-deficient HSPCs have lower p53 levels, reduced apoptosis, an attenuated unfolded protein response, and accordingly are resistant to genotoxic and ER stress. The low biosynthetic activity and corresponding stress resistance provides a selective advantage to Runx1-deficient HSPCs, allowing them to expand in the bone marrow and outcompete normal HSPCs.

Indexed as

Organelle BiogenesisAnimalsAutophagyCore Binding Factor Alpha 2 SubunitHematopoietic Stem CellsHumansMiceMutagensRepetitive Sequences, Nucleic AcidRibosomesRNA, MessengerRNA, RibosomalSignal TransductionStress, PhysiologicalTOR Serine-Threonine KinasesTumor Suppressor Protein p53Core Binding Factor Alpha 2 SubunitMutagensRNA, MessengerRNA, RibosomalTOR Serine-Threonine KinasesTumor Suppressor Protein p53

Identifiers

PMID26165925
PMCPMC4530029
OpenAlexW1736968472

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.