Evidence map›Paper›PMID 26164777›Full record

ArticleInternational journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases2015

Genetic relatedness of selected clinical and environmental non-O1/O139 Vibrio cholerae.

Antonina Aydanian, Li Tang, Yuansha Chen, J Glenn Morris, Peter Olsen, Judith A Johnson, G Balakrish Nair, O Colin Stine

Abstract read
In one paragraph

Article in International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Microbial genomics · 2023
    Article
  2. Review
  3. Microbial genomics · 2021
    Article
  4. Two cases of septic shock with different outcomes caused by non-O1/non-O139The Journal of international medical research · 2020
    Article
  5. Article
  6. Article
  7. Origins of the current seventh cholera pandemic.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Antonina AydanianFDA, Bethesda, Maryland, USA.
Li TangUniversity of Maryland College of Medicine, Baltimore, Maryland, USA.
Yuansha ChenUniversity of Maryland College of Medicine, Baltimore, Maryland, USA.
J Glenn MorrisEmerging Pathogens Institute, University of Florida, Gainesville, Florida, USA.
Peter OlsenDepartment of Computer Science, University of Maryland Baltimore County, Catonsville, MD, USA.
Judith A JohnsonEmerging Pathogens Institute, University of Florida, Gainesville, Florida, USA.
G Balakrish NairTranslational Health Science and Technology Institute, Gurgaon, Haryana, India.
O Colin StineUniversity of Maryland College of Medicine, Baltimore, Maryland, USA.

Funding

EPIDEMIOLOGY &ECOLOGY OF VIBRIO CHOLERAE IN BANGLADESHR01AI039129 · NIAID · JOHNS HOPKINS UNIVERSITY · PI SACK, DAVID A · 1996 to 2014
$15.2M
NIAID NIH HHS R01 AI039129
6 · The paper itself

Abstract

backgroundIn an attempt to better understand the non-O1/O139 isolates of Vibrio cholerae, a systematic study of clinical and environmental isolates collected from various geographical locations between the years 1932 and 1998 was conducted.

methodsNinety-nine V. cholerae isolates collected from clinical and environmental sources from various geographical regions between 1932 and 1998 were studied by sequencing seven housekeeping genes. Genetic relatedness was defined by multiple methods that allow for the observed high levels of recombination.

resultsFour V. cholerae subpopulations were determined. One subpopulation contained mostly environmental isolates, a second contained the cholera toxin-positive serogroup O1/O139 isolates, and the other two subpopulations were enriched for non-O1/O139 clinical isolates that were frequently clonally related to each other.

conclusionsThe data suggest that many of these non-O1/O139 clinical isolates were phylogenetically related to common ancestors, even though the isolates had been collected up to 36 years apart and from different countries or continents.

Indexed as

Environmental MicrobiologyHumansVibrio cholerae non-O1Vibrio InfectionsPhylogenetically relatedRecombinationSubpopulationsVibrio cholerae

Identifiers

PMID26164777
PMCPMC4532580

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.