Evidence map›Paper›PMID 26162881›Full record

ArticleApplied and environmental microbiology2015

YvoA and CcpA Repress the Expression of chiB in Bacillus thuringiensis.

Kun Jiang, Li-na Li, Jin-hua Pan, Ting-ting Wang, Yue-hua Chen, Jun Cai

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Chitinases ofFrontiers in microbiology · 2019
    Review
  5. Article
  6. NagRFrontiers in microbiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Kun JiangDepartment of Microbiology, College of Life Sciences, Nankai University, Tianjin, China.
Li-na LiDepartment of Microbiology, College of Life Sciences, Nankai University, Tianjin, China.
Jin-hua PanDepartment of Microbiology, College of Life Sciences, Nankai University, Tianjin, China.
Ting-ting WangDepartment of Microbiology, College of Life Sciences, Nankai University, Tianjin, China.
Yue-hua ChenDepartment of Microbiology, College of Life Sciences, Nankai University, Tianjin, China Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, Tianjin, China Tianjin Key Laboratory of Microbial Functional Genomics, Tianjin, China.
Jun CaiDepartment of Microbiology, College of Life Sciences, Nankai University, Tianjin, China Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, Tianjin, China Tianjin Key Laboratory of Microbial Functional Genomics, Tianjin, China caijun@nankai.edu.cn.
Nankai University · CNMinistry of Education of the People's Republic of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacillus thuringiensis produces chitinases, which are involved in its antifungal activity and facilitate its insecticidal activity. In our recent work, we found that a 16-bp sequence, drechiB (AGACTTCGTGATGTCT), downstream of the minimal promoter region of the chitinase B gene (chiB) was a critical site for the inducible expression of chiB in B. thuringiensis Bti75. In this work, we show that a GntR family transcriptional regulator (named YvoABt), which is homologous to YvoA of Bacillus subtilis, can specifically bind to the drechiB oligonucleotide sequences in vitro by using electrophoretic mobility shift assays (EMSAs) and isothermal titration calorimetry (ITC) assays. The results of quantitative real-time reverse transcription-PCR (qRT-PCR) and Western blotting indicated that deletion of yvoA caused an ∼7.5-fold increase in the expression level of chiB. Furthermore, binding of purified YvoABt to its target DNA could be abolished by glucosamine-6-phosphate (GlcN-6-P). We also confirmed, in the presence of the phosphoprotein Hpr-Ser₄₅-P, that purified CcpABt bound specifically to the promoter of chiB, which contains the "crechiB" sequence (ATAAAGCGTTTACA). According to the results of qRT-PCR and Western blotting, deletion of ccpA resulted in a 39-fold increase in the chiB expression level, and glucose no longer influenced the expression of chiB. We confirm that chiB is negatively controlled by both CcpABt and YvoABt in Bti75.

Indexed as

Down-RegulationBacillus thuringiensisBacterial ProteinsChitinasesGene Expression Regulation, BacterialPromoter Regions, GeneticRepressor ProteinsBacterial ProteinsChitinasesRepressor Proteins

Identifiers

PMID26162881
PMCPMC4561717
OpenAlexW2164798348

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.