Evidence map›Paper›PMID 26162625›Full record

ArticleThe EMBO journal2015

Lipid droplets and their component triglycerides and steryl esters regulate autophagosome biogenesis.

Tomer Shpilka, Evelyn Welter, Noam Borovsky, Nira Amar, Muriel Mari, Fulvio Reggiori, Zvulun Elazar

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 112 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
112citing papers in PubMed, 3 pooled it
15.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

112 citing papers in PubMed, 3 syntheses or guidelines pooled it, 202 citations in OpenAlex.

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  19. Emerging role of lipophagy in liver disorders.Molecular and cellular biochemistry · 2024
    Review
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52 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Tomer ShpilkaDepartment of Biological Chemistry, The Weizmann Institute of Science, Rehovot, Israel.
Evelyn WelterDepartment of Biological Chemistry, The Weizmann Institute of Science, Rehovot, Israel.
Noam BorovskyDepartment of Biological Chemistry, The Weizmann Institute of Science, Rehovot, Israel.
Nira AmarDepartment of Biological Chemistry, The Weizmann Institute of Science, Rehovot, Israel.
Muriel MariDepartment of Cell Biology, University Medical Center Utrecht, Utrecht, The Netherlands.
Fulvio ReggioriDepartment of Cell Biology, University Medical Center Utrecht, Utrecht, The Netherlands.
Zvulun ElazarDepartment of Biological Chemistry, The Weizmann Institute of Science, Rehovot, Israel zvulun.elazar@weizmann.ac.il.
Weizmann Institute of Science · ILUniversity Medical Center Utrecht · NLUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autophagy is a major catabolic process responsible for the delivery of proteins and organelles to the lysosome/vacuole for degradation. Malfunction of this pathway has been implicated in numerous pathological conditions. Different organelles have been found to contribute to the formation of autophagosomes, but the exact mechanism mediating this process remains obscure. Here, we show that lipid droplets (LDs) are important for the regulation of starvation-induced autophagy. Deletion of Dga1 and Lro1 enzymes responsible for triacylglycerol (TAG) synthesis, or of Are1 and Are2 enzymes responsible for the synthesis of steryl esters (STE), results in the inhibition of autophagy. Moreover, we identified the STE hydrolase Yeh1 and the TAG lipase Ayr1 as well as the lipase/hydrolase Ldh1 as essential for autophagy. Finally, we provide evidence that the ER-LD contact-site proteins Ice2 and Ldb16 regulate autophagy. Our study thus highlights the importance of lipid droplet dynamics for the autophagic process under nitrogen starvation.

Indexed as

AutophagyEstersLipid DropletsMetabolic Networks and PathwaysPhagosomesSaccharomyces cerevisiaeTriglyceridesEstersTriglyceridesAtg8autophagosome biogenesisautophagyfatty acid synthaselipid droplets

Identifiers

PMID26162625
PMCPMC4557665
OpenAlexW2101871339

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.