Evidence map›Paper›PMID 26161530›Full record

ArticlePloS one2015

Against All Odds: Trehalose-6-Phosphate Synthase and Trehalase Genes in the Bdelloid Rotifer Adineta vaga Were Acquired by Horizontal Gene Transfer and Are Upregulated during Desiccation.

Boris Hespeels, Xiang Li, Jean-François Flot, Lise-Marie Pigneur, Jeremy Malaisse, Corinne Da Silva, Karine Van Doninck

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
8.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. The eukaryotic horizontal gene transfer dataset a compendium.bioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. The nematodePeerJ · 2024
    Article
  9. Article
  10. Article
  11. Horizontal Gene Transfers in Plants.Life (Basel, Switzerland) · 2021
    Review
  12. Article
  13. Article
  14. Review
  15. Hyperthermal-driven mass extinctions: killing models during the Permian-Triassic mass extinction.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2018
    Review
  16. Trehalose metabolism genes render rice white tip nematodeThe Journal of experimental biology · 2018
    Article
  17. Trehalose metabolism genes ofBiology open · 2017
    Article
  18. No evidence for extensive horizontal gene transfer in the genome of the tardigrade Hypsibius dujardini.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Boris HespeelsLEGE laboratory, URBE, Department of Biology, University of Namur, Namur, Belgium.
Xiang LiLEGE laboratory, URBE, Department of Biology, University of Namur, Namur, Belgium.
Jean-François FlotDepartment of Genetics, Evolution and Environment, University College London, London, United Kingdom.
Lise-Marie PigneurLEGE laboratory, URBE, Department of Biology, University of Namur, Namur, Belgium.
Jeremy MalaisseResearch Unit for Molecular Physiology, Cell and Tissue Laboratory, Namur, Belgium.
Corinne Da SilvaCEA-Institut de Génomique, GENOSCOPE, Centre National de Séquençage, Evry, France.
Karine Van DoninckLEGE laboratory, URBE, Department of Biology, University of Namur, Namur, Belgium; naXys, Namur Center for Complex Systems, University of Namur, Namur, Belgium.
University of Namur · BEGenoscope · FRUniversity College London · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The disaccharide sugar trehalose is essential for desiccation resistance in most metazoans that survive dryness; however, neither trehalose nor the enzymes involved in its metabolism have ever been detected in bdelloid rotifers despite their extreme resistance to desiccation. Here we screened the genome of the bdelloid rotifer Adineta vaga for genes involved in trehalose metabolism. We discovered a total of four putative trehalose-6-phosphate synthase (TPS) and seven putative trehalase (TRE) gene copies in the genome of this ameiotic organism; however, no trehalose-6-phosphate phosphatase (TPP) gene or domain was detected. The four TPS copies of A. vaga appear more closely related to plant and fungi proteins, as well as to some protists, whereas the seven TRE copies fall in bacterial clades. Therefore, A. vaga likely acquired its trehalose biosynthesis and hydrolysis genes by horizontal gene transfers. Nearly all residues important for substrate binding in the predicted TPS domains are highly conserved, supporting the hypothesis that several copies of the genes might be functional. Besides, RNAseq library screening showed that trehalase genes were highly expressed compared to TPS genes, explaining probably why trehalose had not been detected in previous studies of bdelloids. A strong overexpression of their TPS genes was observed when bdelloids enter desiccation, suggesting a possible signaling role of trehalose-6-phosphate or trehalose in this process.

Indexed as

Gene Transfer, HorizontalUp-RegulationAnimalsDesiccationGene DosageGlucosyltransferasesHelminth ProteinsMetabolic Networks and PathwaysPhosphoric Monoester HydrolasesPhylogenyReverse Transcriptase Polymerase Chain ReactionRotiferaTranscriptional ActivationTrehalaseTrehaloseGlucosyltransferasesHelminth ProteinsPhosphoric Monoester HydrolasesTrehalaseTrehalosetrehalose-6-phosphate synthasetrehalose-phosphatase

Identifiers

PMID26161530
PMCPMC4498783
OpenAlexW1581648226

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.