Evidence map›Paper›PMID 26161085›Full record

ArticleFrontiers in plant science2015

5-azacytidine promotes microspore embryogenesis initiation by decreasing global DNA methylation, but prevents subsequent embryo development in rapeseed and barley.

María-Teresa Solís, Ahmed-Abdalla El-Tantawy, Vanesa Cano, María C Risueño, Pilar S Testillano

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 94 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

María-Teresa SolísPollen Biotechnology of Crop Plants Group, Biological Research Center (CIB) - Spanish National Research Council (CSIC) Madrid, Spain.
Ahmed-Abdalla El-TantawyPollen Biotechnology of Crop Plants Group, Biological Research Center (CIB) - Spanish National Research Council (CSIC) Madrid, Spain.
Vanesa CanoPollen Biotechnology of Crop Plants Group, Biological Research Center (CIB) - Spanish National Research Council (CSIC) Madrid, Spain.
María C RisueñoPollen Biotechnology of Crop Plants Group, Biological Research Center (CIB) - Spanish National Research Council (CSIC) Madrid, Spain.
Pilar S TestillanoPollen Biotechnology of Crop Plants Group, Biological Research Center (CIB) - Spanish National Research Council (CSIC) Madrid, Spain.
National Research Council · LK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microspores are reprogrammed by stress in vitro toward embryogenesis. This process is an important tool in breeding to obtain double-haploid plants. DNA methylation is a major epigenetic modification that changes in differentiation and proliferation. We have shown changes in global DNA methylation during microspore reprogramming. 5-Azacytidine (AzaC) cannot be methylated and leads to DNA hypomethylation. AzaC is a useful demethylating agent to study DNA dynamics, with a potential application in microspore embryogenesis. This work analyzes the effects of short and long AzaC treatments on microspore embryogenesis initiation and progression in two species, the dicot Brassica napus and the monocot Hordeum vulgare. This involved the quantitative analyses of proembryo and embryo production, the quantification of DNA methylation, 5-methyl-deoxy-cytidine (5mdC) immunofluorescence and confocal microscopy, and the analysis of chromatin organization (condensation/decondensation) by light and electron microscopy. Four days of AzaC treatments (2.5 μM) increased embryo induction, response associated with a decrease of DNA methylation, modified 5mdC, and heterochromatin patterns compared to untreated embryos. By contrast, longer AzaC treatments diminished embryo production. Similar effects were found in both species, indicating that DNA demethylation promotes microspore reprogramming, totipotency acquisition, and embryogenesis initiation, while embryo differentiation requires de novo DNA methylation and is prevented by AzaC. This suggests a role for DNA methylation in the repression of microspore reprogramming and possibly totipotency acquisition. Results provide new insights into the role of epigenetic modifications in microspore embryogenesis and suggest a potential benefit of inhibitors, such as AzaC, to improve the process efficiency in biotechnology and breeding programs.

Indexed as

Brassica napusdemethylating agents, totipotencyepigenetic inhibitorsHordeum vulgaremicrospore culturemicrospore reprogramming

Identifiers

PMID26161085
PMCPMC4479788
OpenAlexW1592533994

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.