Evidence map›Paper›PMID 26160962›Full record

ArticlePlant physiology2015

Identification of Regions in the Receiver Domain of the ETHYLENE RESPONSE1 Ethylene Receptor of Arabidopsis Important for Functional Divergence.

Arkadipta Bakshi, Rebecca L Wilson, Randy F Lacey, Heejung Kim, Sai Keerthana Wuppalapati, Brad M Binder

Abstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Ethylene signaling in plants.The Journal of biological chemistry · 2020
    Review
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Focus on Ethylene.Plant physiology · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Arkadipta BakshiGenome Science and Technology Program (A.B., B.M.B.) and Department of Biochemistry, Cellular, and Molecular Biology (R.L.W., R.F.L., H.K., S.K.W., B.M.B.), University of Tennessee, Knoxville, Tennessee 37996.
Rebecca L WilsonGenome Science and Technology Program (A.B., B.M.B.) and Department of Biochemistry, Cellular, and Molecular Biology (R.L.W., R.F.L., H.K., S.K.W., B.M.B.), University of Tennessee, Knoxville, Tennessee 37996.ORCID http://orcid.org/0000-0002-3309-8185
Randy F LaceyGenome Science and Technology Program (A.B., B.M.B.) and Department of Biochemistry, Cellular, and Molecular Biology (R.L.W., R.F.L., H.K., S.K.W., B.M.B.), University of Tennessee, Knoxville, Tennessee 37996.
Heejung KimGenome Science and Technology Program (A.B., B.M.B.) and Department of Biochemistry, Cellular, and Molecular Biology (R.L.W., R.F.L., H.K., S.K.W., B.M.B.), University of Tennessee, Knoxville, Tennessee 37996.
Sai Keerthana WuppalapatiGenome Science and Technology Program (A.B., B.M.B.) and Department of Biochemistry, Cellular, and Molecular Biology (R.L.W., R.F.L., H.K., S.K.W., B.M.B.), University of Tennessee, Knoxville, Tennessee 37996.
Brad M BinderGenome Science and Technology Program (A.B., B.M.B.) and Department of Biochemistry, Cellular, and Molecular Biology (R.L.W., R.F.L., H.K., S.K.W., B.M.B.), University of Tennessee, Knoxville, Tennessee 37996 bbinder@utk.edu.ORCID http://orcid.org/0000-0002-8172-2034

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ethylene influences the growth and development of Arabidopsis (Arabidopsis thaliana) via five receptor isoforms. However, the ETHYLENE RESPONSE1 (ETR1) ethylene receptor has unique, and sometimes contrasting, roles from the other receptor isoforms. Prior research indicates that the receiver domain of ETR1 is important for some of these noncanonical roles. We determined that the ETR1 receiver domain is not needed for ETR1's predominant role in mediating responses to the ethylene antagonist, silver. To understand the structure-function relationship underlying the unique roles of the ETR1 receiver domain in the control of specific traits, we performed alanine-scanning mutagenesis. We chose amino acids that are poorly conserved and are in regions predicted to have altered tertiary structure compared with the receiver domains of the other two receptors that contain a receiver domain, ETR2 and ETHYLENE INSENSITIVE4. The effects of these mutants on various phenotypes were examined in transgenic, receptor-deficient Arabidopsis plants. Some traits, such as growth in air and growth recovery after the removal of ethylene, were unaffected by these mutations. By contrast, three mutations on one surface of the receiver domain rendered the transgene unable to rescue ethylene-stimulated nutations. Additionally, several mutations on another surface altered germination on salt. Some of these mutations conferred hyperfunctionality to ETR1 in the context of seed germination on salt, but not for other traits, that correlated with increased responsiveness to abscisic acid. Thus, the ETR1 receiver domain has multiple functions where different surfaces are involved in the control of different traits. Models are discussed for these observations.

Indexed as

Signal TransductionAbscisic AcidArabidopsisArabidopsis ProteinsEthylenesMutationPhenotypePlant Growth RegulatorsPlants, Genetically ModifiedProtein IsoformsProtein Structure, TertiaryReceptors, Cell SurfaceAbscisic AcidArabidopsis ProteinsethyleneEthylenesETR1 protein, ArabidopsisPlant Growth RegulatorsProtein IsoformsReceptors, Cell Surface

Identifiers

PMID26160962
PMCPMC4577405

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.