Evidence map›Paper›PMID 26160175›Full record

ArticleThe Journal of biological chemistry2015

Structural Basis for Antigen Recognition by Transglutaminase 2-specific Autoantibodies in Celiac Disease.

Xi Chen, Kathrin Hnida, Melissa Ann Graewert, Jan Terje Andersen, Rasmus Iversen, Anne Tuukkanen, Dmitri Svergun, Ludvig M Sollid

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 29 citations in OpenAlex.

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  17. Recent Advances in Celiac Disease from TTG to Gluten in Pee.Clinical and translational gastroenterology · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Xi ChenFrom the Centre for Immune Regulation and Department of Immunology, University of Oslo and Oslo University Hospital, N-0372 Oslo, Norway and.
Kathrin HnidaFrom the Centre for Immune Regulation and Department of Immunology, University of Oslo and Oslo University Hospital, N-0372 Oslo, Norway and.
Melissa Ann GraewertEuropean Molecular Biology Laboratory, Hamburg Outstation, D-22607 Hamburg, Germany.
Jan Terje AndersenFrom the Centre for Immune Regulation and Department of Immunology, University of Oslo and Oslo University Hospital, N-0372 Oslo, Norway and.
Rasmus IversenFrom the Centre for Immune Regulation and Department of Immunology, University of Oslo and Oslo University Hospital, N-0372 Oslo, Norway and.
Anne TuukkanenEuropean Molecular Biology Laboratory, Hamburg Outstation, D-22607 Hamburg, Germany.
Dmitri SvergunEuropean Molecular Biology Laboratory, Hamburg Outstation, D-22607 Hamburg, Germany.
Ludvig M SollidFrom the Centre for Immune Regulation and Department of Immunology, University of Oslo and Oslo University Hospital, N-0372 Oslo, Norway and l.m.sollid@medisin.uio.no.
European Molecular Biology Laboratory · DEUniversity of Oslo · NOOslo University Hospital · NO

Funding

European Research Council 268541
6 · The paper itself

Abstract

Antibodies to the autoantigen transglutaminase 2 (TG2) are a hallmark of celiac disease. We have studied the interaction between TG2 and an anti-TG2 antibody (679-14-E06) derived from a single gut IgA plasma cell of a celiac disease patient. The antibody recognizes one of four identified epitopes targeted by antibodies of plasma cells of the disease lesion. The binding interface was identified by small angle x-ray scattering, ab initio and rigid body modeling using the known crystal structure of TG2 and the crystal structure of the antibody Fab fragment, which was solved at 2.4 Å resolution. The result was confirmed by testing binding of the antibody to TG2 mutants by ELISA and surface plasmon resonance. TG2 residues Arg-116 and His-134 were identified to be critical for binding of 679-14-E06 as well as other epitope 1 antibodies. In contrast, antibodies directed toward the two other main epitopes (epitopes 2 and 3) were not affected by these mutations. Molecular dynamics simulations suggest interactions of 679-14-E06 with the N-terminal domain of TG2 via the CDR2 and CDR3 loops of the heavy chain and the CDR2 loop of the light chain. In addition there were contacts of the framework 3 region of the heavy chain with the catalytic domain of TG2. The results provide an explanation for the biased usage of certain heavy and light chain gene segments by epitope 1-specific antibodies in celiac disease.

Indexed as

AutoantibodiesCeliac DiseaseEpitopesGTP-Binding ProteinsHumansImmunoglobulin Fab FragmentsMolecular Dynamics SimulationMutagenesis, Site-DirectedProtein ConformationProtein Glutamine gamma Glutamyltransferase 2Scattering, Small AngleSurface Plasmon ResonanceTransglutaminasesX-Ray DiffractionAutoantibodiesEpitopesGTP-Binding ProteinsImmunoglobulin Fab FragmentsProtein Glutamine gamma Glutamyltransferase 2Transglutaminasesantibodyceliac diseaseepitope mappingmutagenesissmall-angle x-ray scattering (SAXS)surface plasmon resonance (SPR)transglutaminase

Identifiers

PMID26160175
PMCPMC4571865
OpenAlexW2097682417

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.