Evidence map›Paper›PMID 26160044›Full record

ArticleBMC plant biology2015

Arabidopsis plants deficient in constitutive class profilins reveal independent and quantitative genetic effects.

Kristofer J Müssar, Muthugapatti K Kandasamy, Elizabeth C McKinney, Richard B Meagher

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 21 citations in OpenAlex.

  1. Genome-Wide Analysis ofCurrent issues in molecular biology · 2024
    Article
  2. Article
  3. Review
  4. Evolution of Functional Diversity Among Actin-BindingFrontiers in cell and developmental biology · 2020
    Article
  5. Profilin choreographs actin and microtubules in cells and cancer.International review of cell and molecular biology · 2020
    Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kristofer J MüssarGenetics Department, Davison Life Sciences Building, University of Georgia, Athens, GA, 30602, USA. kjmussar@gmail.com.
Muthugapatti K KandasamyGenetics Department, Davison Life Sciences Building, University of Georgia, Athens, GA, 30602, USA. kandu@uga.edu.
Elizabeth C McKinneyGenetics Department, Davison Life Sciences Building, University of Georgia, Athens, GA, 30602, USA. emckiney@uga.edu.
Richard B MeagherGenetics Department, Davison Life Sciences Building, University of Georgia, Athens, GA, 30602, USA. meagher@uga.edu.
University of Georgia · US

Funding

T32 Predoctoral training grant in geneticsT32GM007103 · NIGMS · UNIVERSITY OF GEORGIA (UGA) · PI DYER, KELLY A · 1985 to 2021
$5.9M
DIFFERENTIAL EXPRESSION OF THE DIVERSE PLANT ACTINSR01GM036397 · NIGMS · UNIVERSITY OF GEORGIA (UGA) · PI MEAGHER, RICHARD BRIAN · 1986 to 2011
$4.3M
NIGMS NIH HHS GM07103-37NIGMS NIH HHS GM36397-26NIGMS NIH HHS R01 GM036397NIGMS NIH HHS T32 GM007103
6 · The paper itself

Abstract

backgroundThe actin cytoskeleton is involved in an array of integral structural and developmental processes throughout the cell. One of actin's best-studied binding partners is the small ubiquitously expressed protein, profilin. Arabidopsis thaliana is known to encode a family of five profilin sequence variants: three vegetative (also constitutive) profilins that are predominantly expressed in all vegetative tissues and ovules, and two reproductive profilins that are specifically expressed in pollen. This paper analyzes the roles of the three vegetative profilin members, PRF1, PRF2, and PRF3, in plant cell and organ development.

resultsUsing a collection of knockout or severe knockdown T-DNA single mutants, we found that defects in each of the three variants gave rise to specific developmental deficiencies. Plants lacking PRF1 or PRF2 had defects in rosette leaf morphology and inflorescence stature, while those lacking PRF3 led to plants with slightly elongated petioles. To further examine these effects, double mutants and double and triple gene-silenced RNAi epialleles were created. These plants displayed significantly compounded developmental defects, as well as distinct lateral root growth morphological phenotypes.

conclusionThese results suggest that having at least one vegetative profilin gene is essential to viability. Evidence is presented that combinations of independent function, quantitative genetic effects, and functional redundancy have preserved the three vegetative profilin genes in the Arabidopsis lineage.

Indexed as

Organogenesis, PlantArabidopsisArabidopsis ProteinsDNA, BacterialDNA, PlantGene Knockdown TechniquesMutationPhenotypeProfilinsRNA InterferenceArabidopsis ProteinsDNA, BacterialDNA, PlantProfilinsT-DNA

Identifiers

PMID26160044
PMCPMC4702419
OpenAlexW1504446821

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.