Evidence map›Paper›PMID 26159706›Full record

ArticleVeterinary research2015

Proteomic analysis of purified turkey adenovirus 3 virions.

Pankaj Kumar, Jan van den Hurk, Lisanework E Ayalew, Amit Gaba, Suresh K Tikoo

Abstract read
In one paragraph

Article in Veterinary research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Pankaj KumarVaccine and Infectious Disease Organization -International Vaccine Center (VIDO- InterVac1), University of Saskatchewan, Saskatoon, S7N 5E3, SK, Canada. panky8@yahoo.com.
Jan van den HurkVaccine and Infectious Disease Organization -International Vaccine Center (VIDO- InterVac1), University of Saskatchewan, Saskatoon, S7N 5E3, SK, Canada. jan.vandenhurk@usask.ca.
Lisanework E AyalewVaccine and Infectious Disease Organization -International Vaccine Center (VIDO- InterVac1), University of Saskatchewan, Saskatoon, S7N 5E3, SK, Canada. ayalew.lisanework@gmail.com.
Amit GabaVaccine and Infectious Disease Organization -International Vaccine Center (VIDO- InterVac1), University of Saskatchewan, Saskatoon, S7N 5E3, SK, Canada. dramitgaba@gmail.com.
Suresh K TikooVaccine and Infectious Disease Organization -International Vaccine Center (VIDO- InterVac1), University of Saskatchewan, Saskatoon, S7N 5E3, SK, Canada. Suresh.tik@usask.ca.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Turkey adenovirus 3 (TAdV-3) causes high mortality and significant economic losses to the turkey industry. However, little is known about the molecular determinants required for viral replication and pathogenesis. Moreover, TAdV-3 does not grow well in cell culture, thus detailed structural studies of the infectious particle is particularly challenging. To develop a better understanding of virus-host interactions, we performed a comprehensive proteomic analysis of proteinase K treated purified TAdV-3 virions isolated from spleens of infected turkeys, by utilizing one-dimensional liquid chromatography mass spectrometry. Our analysis resulted in the identification of 13 viral proteins associated with TAdV-3 virions including a novel uncharacterized TaV3gp04 protein. Further, we detected 18 host proteins in purified virions, many of which are involved in cell-to cell spread, cytoskeleton dynamics and virus replication. Notably, seven of these host proteins have not yet been reported to be present in any other purified virus. In addition, five of these proteins are known antiviral host restriction factors. The availability of reagents allowed us to identify two cellular proteins (collagen alpha-1 (VI) chain and haemoglobin) in the purified TAdV-3 preparations. These results represent the first comprehensive proteomic profile of TAdV-3 and may provide information for illustrating TAdV-3 replication and pathogenesis.

Indexed as

TurkeysAdenoviridae InfectionsAnimalsBlotting, WesternChromatography, LiquidPoultry DiseasesProteomeProteomicsSiadenovirusTandem Mass SpectrometryViral ProteinsViral Structural ProteinsProteomeViral ProteinsViral Structural Proteins

Identifiers

PMID26159706
PMCPMC4497381

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.