Evidence map›Paper›PMID 26159569›Full record

ArticleAnalytical and bioanalytical chemistry2015

In-depth LC-MS/MS analysis of the chicken ovarian cancer proteome reveals conserved and novel differentially regulated proteins in humans.

Angelito I Nepomuceno, Huanjie Shao, Kai Jing, Yibao Ma, James N Petitte, Michael O Idowu, David C Muddiman, Xianjun Fang, Adam M Hawkridge

Open access · greenAbstract read
In one paragraph

Article in Analytical and bioanalytical chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. The PeptideAtlas of the Domestic Laying Hen.Journal of proteome research · 2017
    Article
  5. Review
  6. Enhanced Lipidome Coverage in Shotgun Analyses by using Gas-Phase Fractionation.Journal of the American Society for Mass Spectrometry · 2016
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Angelito I NepomucenoW.M. Keck FTMS Laboratory for Human Health Research, Department of Chemistry, North Carolina State University, 2620 Yarbrough Dr., Box 8204, Raleigh, NC, 27695, USA.
Huanjie Shao
Kai Jing
Yibao Ma
James N Petitte
Michael O Idowu
David C Muddiman
Xianjun Fang
Adam M Hawkridge
Virginia Commonwealth University · USNorth Carolina State University · US

Funding

Virus Vector Shared ResourceP30CA016059 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI Keri R Maher · 1985 to 2026
$51.0M
Development and Application of New Ionization Methods for Biological Mass SpectrometryR01GM087964 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI MUDDIMAN, DAVID C. · 2010 to 2025
$4.7M
Comparative Proteomics Applied to the Avian Model of Ovarian CancerK25CA128666 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI HAWKRIDGE, ADAM M · 2007 to 2011
$717k
Regulation of lipogenesis by lysophosphatidic acid in ovarian cancerR21CA161478 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI FANG, XIANJUN · 2011 to 2012
$358k
NCI NIH HHS K25 CA128666NCI NIH HHS K25CA128666NCI NIH HHS P30 CA016059NCI NIH HHS R21 CA161478NCI NIH HHS R21CA161478NIGMS NIH HHS R01 GM087964NIGMS NIH HHS R01GM087964
6 · The paper itself

Abstract

Ovarian cancer (OVC) remains the most lethal gynecological malignancy in the world due to the combined lack of early-stage diagnostics and effective therapeutic strategies. The development and application of advanced proteomics technology and new experimental models has created unique opportunities for translational studies. In this study, we investigated the ovarian cancer proteome of the chicken, an emerging experimental model of OVC that develops ovarian tumors spontaneously. Matched plasma, ovary, and oviduct tissue biospecimens derived from healthy, early-stage OVC, and late-stage OVC birds were quantitatively characterized by label-free proteomics. Over 2600 proteins were identified in this study, 348 of which were differentially expressed by more than twofold (p ≤ 0.05) in early- and late-stage ovarian tumor tissue specimens relative to healthy ovarian tissues. Several of the 348 proteins are known to be differentially regulated in human cancers including B2M, CLDN3, EPCAM, PIGR, S100A6, S100A9, S100A11, and TPD52. Of particular interest was ovostatin 2 (OVOS2), a novel 165-kDa protease inhibitor found to be strongly upregulated in chicken ovarian tumors (p = 0.0005) and matched plasma (p = 0.003). Indeed, RT-quantitative PCR and Western blot analysis demonstrated that OVOS2 mRNA and protein were also upregulated in multiple human OVC cell lines compared to normal ovarian epithelia (NOE) cells and immunohistochemical staining confirmed overexpression of OVOS2 in primary human ovarian cancers relative to non-cancerous tissues. Collectively, these data provide the first evidence for involvement of OVOS2 in the pathogenesis of both chicken and human ovarian cancer.

Indexed as

Amino Acid SequenceAnimalsChickensChromatography, LiquidConserved SequenceFemaleGene Expression Regulation, NeoplasticHumansMass SpectrometryMolecular Sequence DataNeoplasm ProteinsOvarian NeoplasmsProteomeSpecies SpecificityNeoplasm ProteinsProteome

Identifiers

PMID26159569
PMCPMC5266611
OpenAlexW842235821

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.