Evidence map›Paper›PMID 26158538›Full record

ArticleNature communications2015

Genome-wide burden of deleterious coding variants increased in schizophrenia.

Loes M Olde Loohuis, Jacob A S Vorstman, Anil P Ori, Kim A Staats, Tina Wang, Alexander L Richards, Ganna Leonenko, James T Walters, Joseph DeYoung, GROUP consortium and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Genetics of Childhood-onset Schizophrenia 2019 Update.Child and adolescent psychiatric clinics of North America · 2020
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Double hits in schizophrenia.Human molecular genetics · 2018
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 3 countries.

Loes M Olde LoohuisCenter for Neurobehavioral Genetics, University of California Los Angeles, Los Angeles, California 90095, USA.
Jacob A S VorstmanDepartment of Psychiatry, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht 3584 CG, The Netherlands.
Anil P OriCenter for Neurobehavioral Genetics, University of California Los Angeles, Los Angeles, California 90095, USA.
Kim A StaatsCenter for Neurobehavioral Genetics, University of California Los Angeles, Los Angeles, California 90095, USA.
Tina WangCenter for Neurobehavioral Genetics, University of California Los Angeles, Los Angeles, California 90095, USA.
Alexander L RichardsMRC Centre for Psychiatric Genetics and Genomics, Cardiff University, Cardiff CF24 4HQ, UK.
Ganna LeonenkoMRC Centre for Psychiatric Genetics and Genomics, Cardiff University, Cardiff CF24 4HQ, UK.
James T WaltersMRC Centre for Psychiatric Genetics and Genomics, Cardiff University, Cardiff CF24 4HQ, UK.
Joseph DeYoungCenter for Neurobehavioral Genetics, University of California Los Angeles, Los Angeles, California 90095, USA.
GROUP consortium
Rita M CantorCenter for Neurobehavioral Genetics, University of California Los Angeles, Los Angeles, California 90095, USA.
Roel A OphoffCenter for Neurobehavioral Genetics, University of California Los Angeles, Los Angeles, California 90095, USA.
University of California, Los Angeles · USCardiff University · GBUniversity Medical Center Utrecht · NLUniversity Medical Center · USUniversity Medical Center Groningen · NLAcademic Medical Center · NLUniversity of Amsterdam · NL

Funding

Training Grant in Neurobehavioral GeneticsT32NS048004 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BEARDEN, CARRIE E, OPHOFF, ROEL A · 2004 to 2025
$5.8M
High-density Genome-wide Association Study SchizophreniaR01MH078075 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI OPHOFF, ROEL A · 2006 to 2009
$3.7M
Rare Coding Variants at Microdeletion Regions and Schizophrenia SusceptibilityR21MH092783 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI OPHOFF, ROEL A · 2011 to 2012
$424k
Medical Research Council G0800509Medical Research Council G0801418Medical Research Council MR/L010305/1NIMH NIH HHS R01 MH078075NIMH NIH HHS R21 MH092783NINDS NIH HHS T32 NS048004PHS HHS NIH/NIMH R21 MH092783
6 · The paper itself

Abstract

Schizophrenia is a common complex disorder with polygenic inheritance. Here we show that by using an approach that compares the individual loads of rare variants in 1,042 schizophrenia cases and 961 controls, schizophrenia cases carry an increased burden of deleterious mutations. At a genome-wide level, our results implicate non-synonymous, splice site as well as stop-altering single-nucleotide variations occurring at minor allele frequency of ≥ 0.01% in the population. In an independent replication sample of 5,585 schizophrenia cases and 8,103 controls of European ancestry we confirm an enrichment in cases of the alleles identified in our study. In addition, the genes implicated by the increased burden of rare coding variants highlight the involvement of neurodevelopment in the aetiology of schizophrenia.

Indexed as

Multifactorial InheritanceAllelesCase-Control StudiesCodon, TerminatorFemaleGene FrequencyGenetic Predisposition to DiseaseGenetic VariationGenome-Wide Association StudyGenotypeHumansMalePolymorphism, Single NucleotideRNA Splice SitesSchizophreniaWhite PeopleCodon, TerminatorRNA Splice Sites

Identifiers

PMID26158538
PMCPMC4499856
OpenAlexW2239574342

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.