Evidence map›Paper›PMID 26158467›Full record

ArticlePLoS pathogens2015

The Broad Neutralizing Antibody Responses after HIV-1 Superinfection Are Not Dominated by Antibodies Directed to Epitopes Common in Single Infection.

Valerie Cortez, Bingjie Wang, Adam Dingens, Mitchell M Chen, Keshet Ronen, Ivelin S Georgiev, R Scott McClelland, Julie Overbaugh

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

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  4. A facile method of mapping HIV-1 neutralizing epitopes using chemically masked cysteines and deep sequencing.Proceedings of the National Academy of Sciences of the United States of America · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Valerie CortezProgram in Molecular and Cellular Biology, University of Washington, Seattle, Washington, United States of America; Human Biology Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Bingjie WangHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Adam DingensProgram in Molecular and Cellular Biology, University of Washington, Seattle, Washington, United States of America; Human Biology Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Mitchell M ChenHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Keshet RonenHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Ivelin S GeorgievVaccine Research Center, National Institutes of Health, Bethesda, Maryland, United States of America.
R Scott McClellandDepartment of Medicine, University of Washington, Seattle, Washington, United States of America.
Julie OverbaughHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Fred Hutch Cancer Center · USNational Institutes of Health · USUniversity of Washington · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Marian Esvelt · 1985 to 2026
$296.4M
EARLY INFECTION IN WOMEN EXPOSED MUCOSALLY TO HIV-1R37AI038518 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI OVERBAUGH, JULIE M. · 1999 to 2019
$12.9M
CHARACTERIZATION OF HIV-1 ANTIBODY RESPONSES IN CHRONICALLY INFECTED WOMENR01AI103981 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI OVERBAUGH, JULIE M. · 2012 to 2015
$2.8M
NCI NIH HHS P30 CA015704NIAID NIH HHS R01 AI103981NIAID NIH HHS R37 AI038518NIAID NIH HHS T32 AI714036
6 · The paper itself

Abstract

HIV-1 vaccines designed to date have failed to elicit neutralizing antibodies (Nabs) that are capable of protecting against globally diverse HIV-1 subtypes. One relevant setting to study the development of a strong, cross-reactive Nab response is HIV-1 superinfection (SI), defined as sequential infections from different source partners. SI has previously been shown to lead to a broader and more potent Nab response when compared to single infection, but it is unclear whether SI also impacts epitope specificity and if the epitopes targeted after SI differ from those targeted after single infection. Here the post-SI Nab responses were examined from 21 Kenyan women collectively exposed to subtypes A, C, and D and superinfected after a median time of ~1.07 years following initial infection. Plasma samples chosen for analysis were collected at a median time point ~2.72 years post-SI. Because previous studies of singly infected populations with broad and potent Nab responses have shown that the majority of their neutralizing activity can be mapped to 4 main epitopes on the HIV-1 Envelope, we focused on these targets, which include the CD4-binding site, a V1/V2 glycan, the N332 supersite in V3, and the membrane proximal external region of gp41. Using standard epitope mapping techniques that were applied to the previous cohorts, the present study demonstrates that SI did not induce a dominant Nab response to any one of these epitopes in the 21 women. Computational sera delineation analyses also suggested that 20 of the 21 superinfected women's Nab responses could not be ascribed a single specificity with high confidence. These data are consistent with a model in which SI with diverse subtypes promotes the development of a broad polyclonal Nab response, and thus would provide support for vaccine designs using multivalent HIV immunogens to elicit a diverse repertoire of Nabs.

Indexed as

AdultAIDS VaccinesAntibodies, NeutralizingAntibody SpecificityEpitope MappingEpitopesFemaleHIV-1HIV AntibodiesHIV InfectionsHumansNeutralization TestsSuperinfectionAIDS VaccinesAntibodies, NeutralizingEpitopesHIV Antibodies

Identifiers

PMID26158467
PMCPMC4497680
OpenAlexW788972034

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.