Evidence map›Paper›PMID 26158404›Full record

ArticleACS chemical biology2015

Dual Screening of BPTF and Brd4 Using Protein-Observed Fluorine NMR Uncovers New Bromodomain Probe Molecules.

Andrew K Urick, Laura M L Hawk, Melissa K Cassel, Neeraj K Mishra, Shuai Liu, Neeta Adhikari, Wei Zhang, Camila O dos Santos, Jennifer L Hall, William C K Pomerantz

Open access · greenAbstract read
In one paragraph

Article in ACS chemical biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 76 citations in OpenAlex.

  1. BPTF is essential for vaccine-induced germinal center B cell responses.Journal of immunology (Baltimore, Md. : 1950) · 2026
    Article
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  3. Review
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  7. ExploitingJournal of the American Chemical Society · 2025
    Article
  8. Perspectives on Applications ofMolecules (Basel, Switzerland) · 2024
    Review
  9. Epigenetics-targeted drugs: current paradigms and future challenges.Signal transduction and targeted therapy · 2024
    Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. RSC chemical biology · 2021
    Review
  15. Article
  16. Article
  17. Review
  18. Perfluorocarbons in Chemical Biology.Chembiochem : a European journal of chemical biology · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Andrew K UrickDepartment of Chemistry, University of Minnesota , 207 Pleasant St. SE, Minneapolis, Minnesota 55455, United States.
Laura M L HawkDepartment of Chemistry, University of Minnesota , 207 Pleasant St. SE, Minneapolis, Minnesota 55455, United States.
Melissa K CasselDepartment of Chemistry, University of Minnesota , 207 Pleasant St. SE, Minneapolis, Minnesota 55455, United States.
Neeraj K MishraDepartment of Chemistry, University of Minnesota , 207 Pleasant St. SE, Minneapolis, Minnesota 55455, United States.
Shuai LiuDepartment of Chemistry, University of Massachusetts Boston , 100 Morrissey Boulevard, Boston, Massachusetts 02125, United States.
Neeta AdhikariLillehei Heart Institute , Department of Medicine, 2231 6th Street SE, Minneapolis, Minnesota 55455, United States.
Wei ZhangDepartment of Chemistry, University of Massachusetts Boston , 100 Morrissey Boulevard, Boston, Massachusetts 02125, United States.
Camila O dos SantosCold Spring Harbor Laboratory , 1 Bungtown Road, Cold Spring Harbor, New York 11724, United States.
Jennifer L HallLillehei Heart Institute , Department of Medicine, 2231 6th Street SE, Minneapolis, Minnesota 55455, United States.
William C K PomerantzDepartment of Chemistry, University of Minnesota , 207 Pleasant St. SE, Minneapolis, Minnesota 55455, United States.
University of Minnesota · USMinneapolis Heart Institute Foundation · USUniversity of Massachusetts Boston · USCold Spring Harbor Laboratory · US

Funding

Single-Cell Biology Shared ResourceP30CA045508 · NCI · COLD SPRING HARBOR LABORATORY · PI John Edward Moses · 1987 to 2026
$118.9M
U Mass Boston / DFHCC U54 Partnership (1 of 2)U54CA156732 · NCI · DANA-FARBER CANCER INST · PI WENDY Beth LONDON · 2010 to 2026
$25.6M
UMass Boston-DF/HCC U54 Partnership (2 of 2)U54CA156734 · NCI · UNIVERSITY OF MASSACHUSETTS BOSTON · PI ADAN COLON-CARMONA, Jill A. Macoska · 2010 to 2026
$24.9M
TRAINING FOR FUTURE BIOTECHNOLOGY DEVELOPMENTT32GM008347 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI SCHMIDT-DANNERT, CLAUDIA · 1990 to 2021
$11.0M
Upgrade of a 500 MHz NMR Spectrometer for Applications in Biomedical ResearchS10OD011952 · OD · UNIVERSITY OF MINNESOTA · PI HOYE, THOMAS R. · 2012 to 2012
$378k
iTC200 MicroCalorimetry Cell Control UnitS10OD017982 · OD · UNIVERSITY OF MINNESOTA · PI ALDRICH, COURTNEY C · 2014 to 2014
$94k
NCI NIH HHS CA045508NCI NIH HHS P30 CA045508NCI NIH HHS U54 CA156732NCI NIH HHS U54CA156732NCI NIH HHS U54 CA156734NIGMS NIH HHS 5T32GM008347-23NIGMS NIH HHS T32 GM008347NIH HHS S10 OD011952NIH HHS S10OD011952NIH HHS S10 OD017982NINDS NIH HHS NS10-OD017982
6 · The paper itself

Abstract

Bromodomain-containing protein dysregulation is linked to cancer, diabetes, and inflammation. Selective inhibition of bromodomain function is a newly proposed therapeutic strategy. We describe a (19)F NMR dual screening method for small molecule discovery using fluorinated tryptophan resonances on two bromodomain-containing proteins. The chemical shift dispersion of (19)F resonances within fluorine-labeled proteins enables the simultaneous analysis of two fluorinated bromodomains by NMR. A library of 229 small molecules was screened against the first bromodomain of Brd4 and the BPTF bromodomain. We report the first small molecule selective for BPTF over Brd4, termed AU1. The Kd = 2.8 μM for AU1, which is active in a cell-based reporter assay. No binding is detected with Brd4. Three new Brd4 inhibitors with submicromolar affinity were also discovered. Brd4 hits were validated in a thermal stability assay and potency determined via fluorescence anisotropy. The speed, ease of interpretation, and low protein concentration needed for protein-observed (19)F NMR experiments in a multiprotein format offers a new method to discover and characterize selective ligands for bromodomain-containing proteins.

Indexed as

Antigens, NuclearBinding, CompetitiveBromodomain Containing ProteinsCell Cycle ProteinsCell LineDrug Delivery SystemsDrug Evaluation, PreclinicalEnzyme InhibitorsFluorineHumansInhibitory Concentration 50Magnetic Resonance ImagingMolecular StructureNerve Tissue ProteinsNuclear ProteinsProtein Structure, TertiaryAntigens, NuclearBRD4 protein, humanBromodomain Containing ProteinsCell Cycle ProteinsEnzyme Inhibitorsfetal Alzheimer antigenFluorineNerve Tissue ProteinsNuclear ProteinsTranscription Factors

Identifiers

PMID26158404
PMCPMC4858447
OpenAlexW2262422677

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.