Evidence map›Paper›PMID 26154743›Full record

ArticleMemorias do Instituto Oswaldo Cruz2015

Molecular profiling of drug resistant isolates of Mycobacterium tuberculosis in the state of Santa Catarina, southern Brazil.

Rodrigo Ivan Prim, Marcos André Schörner, Simone Gonçalves Senna, Christiane Lourenço Nogueira, Anna Carolina Cançado Figueiredo, Jaquelline Germano de Oliveira, Darcita Bürger Rovaris, Maria Luiza Bazzo

Abstract read
In one paragraph

Article in Memorias do Instituto Oswaldo Cruz, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Compensatory effects ofEmerging microbes & infections · 2021
    Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Rodrigo Ivan PrimLaboratório de Biologia Molecular, Sorologia e Micobactérias, Universidade Federal de Santa Catarina, Florianópolis, SC, BR.
Marcos André SchörnerLaboratório de Biologia Molecular, Sorologia e Micobactérias, Universidade Federal de Santa Catarina, Florianópolis, SC, BR.
Simone Gonçalves SennaLaboratório de Biologia Molecular, Sorologia e Micobactérias, Universidade Federal de Santa Catarina, Florianópolis, SC, BR.
Christiane Lourenço NogueiraLaboratório de Biologia Molecular, Sorologia e Micobactérias, Universidade Federal de Santa Catarina, Florianópolis, SC, BR.
Anna Carolina Cançado FigueiredoCentro de Pesquisas René Rachou, Fundação Oswaldo Cruz, Belo Horizonte, MG, BR.
Jaquelline Germano de OliveiraCentro de Pesquisas René Rachou, Fundação Oswaldo Cruz, Belo Horizonte, MG, BR.
Darcita Bürger RovarisLaboratório Central de Saúde Pública de Santa Catarina, Florianópolis, SC, BR.
Maria Luiza BazzoLaboratório de Biologia Molecular, Sorologia e Micobactérias, Universidade Federal de Santa Catarina, Florianópolis, SC, BR.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Drug resistance is a global threat and one of the main contributing factors to tuberculosis (TB) outbreaks. The goal of this study was to analyse the molecular profile of multidrug-resistant TB (MDR-TB) in the state of Santa Catarina in southern Brazil. Fifty-three MDR Mycobacterium tuberculosis clinical isolates were analysed by spoligotyping and a partial region of the rpoB gene, which is associated with rifampicin resistance (RMP-R), was sequenced. Some isolates were also distinguished by their mycobacterial interspersed repetitive units (MIRU). S531L was the most prevalent mutation found within rpoB in RMP-R isolates (58.5%), followed by S531W (20.8%). Only two MDR isolates showed no mutations within rpoB. Isolates of the Latin American Mediterranean (LAM) family were the most prevalent (45.3%) found by spoligotyping, followed by Haarlem (9.4%) and T (7.5%) families. SIT106 was found in 26.4% of isolates and all SIT106 isolates typed by MIRU-12 (5 out of 14) belong to MIT251. There was a high correlation between the S531W mutation and the LAM family mainly because all SIT2263 (LAM9) isolates carry this mutation. Among isolates with the S531W mutation in rpoB MIRU demonstrates a cluster formed by four isolates (SIT2263 and MIT163) and very similar profiles were observed between eight of the nine isolates. Better characterisation of TB isolates may lead to new ways in which to control and treat TB in this region of Brazil.

Indexed as

DNA, BacterialAdultAntitubercular AgentsBacterial ProteinsBacterial Typing TechniquesBrazilDrug Resistance, Multiple, BacterialFemaleGenotypeHumansMaleMutationMycobacterium tuberculosisPolymorphism, Restriction Fragment LengthSequence Analysis, DNATuberculosis, Multidrug-ResistantAntitubercular AgentsBacterial ProteinsDNA, Bacterial

Identifiers

PMID26154743
PMCPMC4569824

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.