Evidence map›Paper›PMID 26153354›Full record

ArticleScientific reports2015

Reinitiation at non-canonical start codons leads to leak expression when incorporating unnatural amino acids.

Tanja Kalstrup, Rikard Blunck

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 46 citations in OpenAlex.

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  3. Split genetically encoded calcium indicators for interorganellar junctions.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  5. Elucidating the clinical and genetic spectrum of inositol polyphosphate phosphatase INPP4A-related neurodevelopmental disorder.Genetics in medicine : official journal of the American College of Medical Genetics · 2025
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  8. Photomodulation of the ASIC1a acidic pocket destabilizes the open state.Protein science : a publication of the Protein Society · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Tanja KalstrupGroupe d'Études des Protéines Membranaires (GÉPROM), Departments of Physics and of Physiology, Université de Montréal, Montréal, QC, Canada.
Rikard BlunckGroupe d'Études des Protéines Membranaires (GÉPROM), Departments of Physics and of Physiology, Université de Montréal, Montréal, QC, Canada.
Université de Montréal · CA

Funding

PHS HHS MOP-102689PHS HHS MOP-136894
6 · The paper itself

Abstract

With the rapid development of a continuously growing selection of unnatural amino acids (UAAs), UAA insertion becomes increasingly popular for investigating proteins. However, it can prove problematic to ensure the homogeneity of the expressed proteins, when homogeneity is compromised by "leak expression". Here, we show that leak expression may be mediated by reinitiation and can result in unwanted proteins when stop codons for UAA insertion are mutated into the N-terminus of proteins. We demonstrate that up to 25% of leak expression occurs through reinitiation in the Shaker-Kv channel when stop codons are located within the first 70 amino acids. Several non-canonical start codons were identified as translation reinitaition sites, and by removing the start codons, we were able to decrease leak expression to less than 1%. Our study emphasizes the need to carefully inspect for leak expression when inserting UAAs and demonstrates how leak expression can be eliminated.

Indexed as

Amino AcidsAmino Acid SequenceAnimalsBase SequenceCodon, InitiatorCodon, TerminatorDrosophilaDrosophila ProteinsMolecular Sequence DataPatch-Clamp TechniquesPotassium ChannelsProtein BiosynthesisRNA, MessengerAmino AcidsCodon, InitiatorCodon, TerminatorDrosophila ProteinsPotassium ChannelsRNA, Messenger

Identifiers

PMID26153354
PMCPMC4648390
OpenAlexW926881003

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.