Evidence map›Paper›PMID 26152711›Full record

ArticlePlant physiology2015

A Member of the Arabidopsis Mitochondrial Transcription Termination Factor Family Is Required for Maturation of Chloroplast Transfer RNAIle(GAU).

Isidora Romani, Nikolay Manavski, Arianna Morosetti, Luca Tadini, Swetlana Maier, Kristina Kühn, Hannes Ruwe, Christian Schmitz-Linneweber, Gerhard Wanner, Dario Leister and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 71 citations in OpenAlex.

  1. Review
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  4. Analysis of the TomatoPlants (Basel, Switzerland) · 2023
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  5. Plant organellar RNA maturation.The Plant cell · 2023
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  7. Light response of gametophyte inFrontiers in plant science · 2023
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  8. Article
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  10. Article
  11. Article
  12. Article
  13. Review
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  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Frontiers in plant science · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Isidora RomaniPlant Molecular Biology (Botany), Department Biology I (I.R., N.M., A.M., L.T., D.L., T.K.), and Ultrastrukturforschung, Department Biology I (G.W.), Ludwig-Maximilians-Universität München, 81252 Planegg-Martinsried, Germany;Mathematisch-Naturwissenschaftliche Fakultät I/Biologie, Molekulare Zellbiologie der Pflanzen, Humboldt-Universität zu Berlin, 10099 Berlin, Germany (S.M., K.K.); andInstitute of Biology, Molecular Genetics, Humboldt-University of Berlin, 10115 Berlin, Germany (H.R., C.S.-L.).ORCID http://orcid.org/0000-0003-3001-5767
Nikolay ManavskiPlant Molecular Biology (Botany), Department Biology I (I.R., N.M., A.M., L.T., D.L., T.K.), and Ultrastrukturforschung, Department Biology I (G.W.), Ludwig-Maximilians-Universität München, 81252 Planegg-Martinsried, Germany;Mathematisch-Naturwissenschaftliche Fakultät I/Biologie, Molekulare Zellbiologie der Pflanzen, Humboldt-Universität zu Berlin, 10099 Berlin, Germany (S.M., K.K.); andInstitute of Biology, Molecular Genetics, Humboldt-University of Berlin, 10115 Berlin, Germany (H.R., C.S.-L.).ORCID http://orcid.org/0000-0003-2740-5991
Arianna MorosettiPlant Molecular Biology (Botany), Department Biology I (I.R., N.M., A.M., L.T., D.L., T.K.), and Ultrastrukturforschung, Department Biology I (G.W.), Ludwig-Maximilians-Universität München, 81252 Planegg-Martinsried, Germany;Mathematisch-Naturwissenschaftliche Fakultät I/Biologie, Molekulare Zellbiologie der Pflanzen, Humboldt-Universität zu Berlin, 10099 Berlin, Germany (S.M., K.K.); andInstitute of Biology, Molecular Genetics, Humboldt-University of Berlin, 10115 Berlin, Germany (H.R., C.S.-L.).
Luca TadiniPlant Molecular Biology (Botany), Department Biology I (I.R., N.M., A.M., L.T., D.L., T.K.), and Ultrastrukturforschung, Department Biology I (G.W.), Ludwig-Maximilians-Universität München, 81252 Planegg-Martinsried, Germany;Mathematisch-Naturwissenschaftliche Fakultät I/Biologie, Molekulare Zellbiologie der Pflanzen, Humboldt-Universität zu Berlin, 10099 Berlin, Germany (S.M., K.K.); andInstitute of Biology, Molecular Genetics, Humboldt-University of Berlin, 10115 Berlin, Germany (H.R., C.S.-L.).ORCID http://orcid.org/0000-0003-2315-7695
Swetlana MaierPlant Molecular Biology (Botany), Department Biology I (I.R., N.M., A.M., L.T., D.L., T.K.), and Ultrastrukturforschung, Department Biology I (G.W.), Ludwig-Maximilians-Universität München, 81252 Planegg-Martinsried, Germany;Mathematisch-Naturwissenschaftliche Fakultät I/Biologie, Molekulare Zellbiologie der Pflanzen, Humboldt-Universität zu Berlin, 10099 Berlin, Germany (S.M., K.K.); andInstitute of Biology, Molecular Genetics, Humboldt-University of Berlin, 10115 Berlin, Germany (H.R., C.S.-L.).
Kristina KühnPlant Molecular Biology (Botany), Department Biology I (I.R., N.M., A.M., L.T., D.L., T.K.), and Ultrastrukturforschung, Department Biology I (G.W.), Ludwig-Maximilians-Universität München, 81252 Planegg-Martinsried, Germany;Mathematisch-Naturwissenschaftliche Fakultät I/Biologie, Molekulare Zellbiologie der Pflanzen, Humboldt-Universität zu Berlin, 10099 Berlin, Germany (S.M., K.K.); andInstitute of Biology, Molecular Genetics, Humboldt-University of Berlin, 10115 Berlin, Germany (H.R., C.S.-L.).ORCID http://orcid.org/0000-0001-6747-783X
Hannes RuwePlant Molecular Biology (Botany), Department Biology I (I.R., N.M., A.M., L.T., D.L., T.K.), and Ultrastrukturforschung, Department Biology I (G.W.), Ludwig-Maximilians-Universität München, 81252 Planegg-Martinsried, Germany;Mathematisch-Naturwissenschaftliche Fakultät I/Biologie, Molekulare Zellbiologie der Pflanzen, Humboldt-Universität zu Berlin, 10099 Berlin, Germany (S.M., K.K.); andInstitute of Biology, Molecular Genetics, Humboldt-University of Berlin, 10115 Berlin, Germany (H.R., C.S.-L.).
Christian Schmitz-LinneweberPlant Molecular Biology (Botany), Department Biology I (I.R., N.M., A.M., L.T., D.L., T.K.), and Ultrastrukturforschung, Department Biology I (G.W.), Ludwig-Maximilians-Universität München, 81252 Planegg-Martinsried, Germany;Mathematisch-Naturwissenschaftliche Fakultät I/Biologie, Molekulare Zellbiologie der Pflanzen, Humboldt-Universität zu Berlin, 10099 Berlin, Germany (S.M., K.K.); andInstitute of Biology, Molecular Genetics, Humboldt-University of Berlin, 10115 Berlin, Germany (H.R., C.S.-L.).
Gerhard WannerPlant Molecular Biology (Botany), Department Biology I (I.R., N.M., A.M., L.T., D.L., T.K.), and Ultrastrukturforschung, Department Biology I (G.W.), Ludwig-Maximilians-Universität München, 81252 Planegg-Martinsried, Germany;Mathematisch-Naturwissenschaftliche Fakultät I/Biologie, Molekulare Zellbiologie der Pflanzen, Humboldt-Universität zu Berlin, 10099 Berlin, Germany (S.M., K.K.); andInstitute of Biology, Molecular Genetics, Humboldt-University of Berlin, 10115 Berlin, Germany (H.R., C.S.-L.).
Dario LeisterPlant Molecular Biology (Botany), Department Biology I (I.R., N.M., A.M., L.T., D.L., T.K.), and Ultrastrukturforschung, Department Biology I (G.W.), Ludwig-Maximilians-Universität München, 81252 Planegg-Martinsried, Germany;Mathematisch-Naturwissenschaftliche Fakultät I/Biologie, Molekulare Zellbiologie der Pflanzen, Humboldt-Universität zu Berlin, 10099 Berlin, Germany (S.M., K.K.); andInstitute of Biology, Molecular Genetics, Humboldt-University of Berlin, 10115 Berlin, Germany (H.R., C.S.-L.).ORCID http://orcid.org/0000-0003-1897-8421
Tatjana KleinePlant Molecular Biology (Botany), Department Biology I (I.R., N.M., A.M., L.T., D.L., T.K.), and Ultrastrukturforschung, Department Biology I (G.W.), Ludwig-Maximilians-Universität München, 81252 Planegg-Martinsried, Germany;Mathematisch-Naturwissenschaftliche Fakultät I/Biologie, Molekulare Zellbiologie der Pflanzen, Humboldt-Universität zu Berlin, 10099 Berlin, Germany (S.M., K.K.); andInstitute of Biology, Molecular Genetics, Humboldt-University of Berlin, 10115 Berlin, Germany (H.R., C.S.-L.) tatjana.kleine@lmu.de.ORCID http://orcid.org/0000-0001-6455-3470
Humboldt-Universität zu Berlin · DECal Poly Humboldt · USLudwig-Maximilians-Universität München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plastid gene expression is crucial for organelle function, but the factors that control it are still largely unclear. Members of the so-called mitochondrial transcription termination factor (mTERF) family are found in metazoans and plants and regulate organellar gene expression at different levels. Arabidopsis (Arabidopsis thaliana) mTERF6 is localized in chloroplasts and mitochondria, and its knockout perturbs plastid development and results in seedling lethality. In the leaky mterf6-1 mutant, a defect in photosynthesis is associated with reduced levels of photosystem subunits, although corresponding messenger RNA levels are unaffected, whereas translational capacity and maturation of chloroplast ribosomal RNAs (rRNAs) are perturbed in mterf6-1 mutants. Bacterial one-hybrid screening, electrophoretic mobility shift assays, and coimmunoprecipitation experiments reveal a specific interaction between mTERF6 and an RNA sequence in the chloroplast isoleucine transfer RNA gene (trnI.2) located in the rRNA operon. In vitro, recombinant mTERF6 bound to its plastid DNA target site can terminate transcription. At present, it is unclear whether disturbed rRNA maturation is a primary or secondary defect. However, it is clear that mTERF6 is required for the maturation of trnI.2. This points to an additional function of mTERFs.

Indexed as

Transcription Termination, Genetic5' Untranslated RegionsAminoacylationArabidopsisArabidopsis ProteinsBase SequenceBasic-Leucine Zipper Transcription FactorsChloroplastsDNA, BacterialGene Expression Regulation, PlantGenetic LociMitochondriaMitochondrial ProteinsMolecular Sequence DataMutagenesis, InsertionalMutation5' Untranslated RegionsArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsDNA, BacterialMitochondrial ProteinsmTERF6 protein, ArabidopsisRNA, RibosomalRNA, Transfer, IleT-DNA

Identifiers

PMID26152711
PMCPMC4577433
OpenAlexW2136004589

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.